| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swol_1927 |
|---|
| Symbol | |
|---|
| ID | 4282399 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008346 |
|---|
| Strand | + |
|---|
| Start bp | 2199453 |
|---|
| End bp | 2200115 |
|---|
| Gene Length | 663 bp |
|---|
| Protein Length | 220 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 638138810 |
|---|
| Product | formate dehydrogenase, putative |
|---|
| Protein accession | YP_754595 |
|---|
| Protein GI | 114567441 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG2864] Cytochrome b subunit of formate dehydrogenase |
|---|
| TIGRFAM ID | [TIGR01583] formate dehydrogenase, gamma subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.58806 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATGAGTA ATGTAAATGG AAAAGTATTA AAACATGGTA CCCAGACCAG AACCATGCAC
TGGATTCACT TGCTGGCCTT CATCATCCTG GGCTTGACTG GAATTGGTTT TTACTGGGAC
ATAGGCGGAA TTGCCAGTAT CTTTGGCGGG GAAGCCAACG CCTCTCTAGT TCATCGCTGG
ACCGGGGTGG TCTTCATTGT AGGACCACTT CTCTATATCT TACTGAATTT TGACCGTTTT
TCTCGTTTTA TTGATACCAT TTCTCACTTC AGCAAAGATG ATTTTGCCTG GCTGAAGGTG
ATGGGAGGAT ACCTTCCCTT TCTTAAGGTA GATGAGGTTC CTGCACAGGA CAAATACAAT
GCGGGCCAAA AAATTCTGGG CTGGTTGATA ATTATCGGTT GCCTTTTGGT AATACTAACT
GGCTTCCCCA TGTGGTTATG GCGTCATTCT GTGCCTGCAG TATTTCTCGC TTTCTGTTAT
GATGTTCACT TTTGGACCGC AATTATTCTG ATATTACTGG TAGCAGGCCA TTTTTTTCTG
GCCGCCATTC ACCCCAAATC TCGGGTTGAA TTCTCCTCCA TGATGCTGGA TGGCTATATC
GATGCAGAGA TTACTGCCCA TCATAACGCC AAATGGTTTA CAGAACTAAA AGAATCATCT
TAA
|
|---|
| Protein sequence | MMSNVNGKVL KHGTQTRTMH WIHLLAFIIL GLTGIGFYWD IGGIASIFGG EANASLVHRW
TGVVFIVGPL LYILLNFDRF SRFIDTISHF SKDDFAWLKV MGGYLPFLKV DEVPAQDKYN
AGQKILGWLI IIGCLLVILT GFPMWLWRHS VPAVFLAFCY DVHFWTAIIL ILLVAGHFFL
AAIHPKSRVE FSSMMLDGYI DAEITAHHNA KWFTELKESS
|
|---|
| |