Gene Swol_1923 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwol_1923 
Symbol 
ID4282394 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophomonas wolfei subsp. wolfei str. Goettingen 
KingdomBacteria 
Replicon accessionNC_008346 
Strand
Start bp2193363 
End bp2194094 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content47% 
IMG OID638138805 
Producthypothetical protein 
Protein accessionYP_754591 
Protein GI114567437 
COG category[S] Function unknown 
COG ID[COG2043] Uncharacterized protein conserved in archaea 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.154092 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATTACT ATAATTATGC TCAGGCTCTG AAATATTTTT TGGAACTGTA TCGGCGACCG 
GTGGCGGTTC GTTTTCTTAG CGATGAAGAG GAAGTTCCAC CTGATTACCG CTTTGACCTG
GATCTTAGTT TTTGCCAGTT TGTGATGCTG GCCCAAAATG GGGACAAACT TGTGGCTACT
GCTGATAACC TGGCTTGCGC CAATGGTGCC GCCGCCTTGG GTTTAAGGCC TCTGCCGGAA
AAAATAAGAA GCGGAGAAAT GCATAGCCGG CTGAATCTAT TCGCTTCCCC CGAAATGGCA
GCTCAGGTTT CCGCTCTTAC CCCCCGAATT CCACTGGGAG CTTATCCCCG GATATTGCTG
GCAGCACTGG ATGAGGCTGA TTTTGAGCCC CAGGTAGTTA TCTTACAGGG TAAGCCCGCG
ACTCTAATGT GGGTACTGAT AGCCAACAAC TATCATAAAG GAGGCCGCTA CTCTTTTACT
ACCGCTGTTT CACAGGGAGT TTGTGTAGAT GCCACGGTTA TCCCCTTTTT AGAGGGAAAC
ATCAACTTGA GCCTCAGTTG TTTTGGTGGG CGCGGCTCTA CCGACCAGAA GGAAGACGAA
GTTTTGCTGG GATTACCTTT TAAAGATTTA GAAAAGATAG TTGAAGTACT TCCTGAGCTT
AAAAACACTA TTATGAAACG CAGCATCGAA AAAACCGCCT ATAAGCGATT GCAGGCCAAA
TTAGAGAATT AG
 
Protein sequence
MDYYNYAQAL KYFLELYRRP VAVRFLSDEE EVPPDYRFDL DLSFCQFVML AQNGDKLVAT 
ADNLACANGA AALGLRPLPE KIRSGEMHSR LNLFASPEMA AQVSALTPRI PLGAYPRILL
AALDEADFEP QVVILQGKPA TLMWVLIANN YHKGGRYSFT TAVSQGVCVD ATVIPFLEGN
INLSLSCFGG RGSTDQKEDE VLLGLPFKDL EKIVEVLPEL KNTIMKRSIE KTAYKRLQAK
LEN