Gene Swol_1900 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwol_1900 
Symbol 
ID4283446 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophomonas wolfei subsp. wolfei str. Goettingen 
KingdomBacteria 
Replicon accessionNC_008346 
Strand
Start bp2159289 
End bp2160344 
Gene Length1056 bp 
Protein Length351 aa 
Translation table11 
GC content42% 
IMG OID638138782 
Producthypothetical protein 
Protein accessionYP_754568 
Protein GI114567414 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.744765 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGTAG CATTACTCTC ACCTATTGCC TGGAGAACTC CGCCCCGCCA TTATGGACCC 
TGGGAACGAG TGGTATCTTT AATAGCTGAA GGCCTGGTTA AAAAAGGGGT CGATGTTACT
CTTTTTGCCA CCGGAGACTC CAAAACCGCC GGCCGGCTGG AATATATTTG TCCTATTCCC
TACGAAGAAA ACCCCAATAT GGATGCCAAG GTGTGGGAAG CCATGCACAT AGCCCATCTG
TTCGAACAAG CTCACAAGTT CGATATCATT CATAATAACT ATGATTTTCT GCCCCTGTCA
TACAGCCGTC AGGTAGATAC ACCTATGATA ACCACCATCC ACGGTTTTTC CTCCCCCAAA
ATACTGCCCA TCTACCGGGA ATATAATCGT AATAATTATT ATGTATCAAT AAGCAACGCT
GACCGAAGTC CTGATTTGGA TTATTATGCT ACTGTTTACC ATGGGATTGA TTTAAATGAG
CTTACTTTGA AGCTTAACGC TGGTTCATAC CTTTTATATT TTGGACGCAT TCATCCTGAT
AAGGGTACCG CTCAGGCTAT TGAAATTGCC AGAAAATCCG ATATGCAGTT GCTCATAGCC
GGGATTATTC AGGACAAACA GTATTTTAAC CAACAAATAT ATCCTCGAAT AGACAATAAA
AAAGTTATAT ATTTGGGATC AGTAGGTCCA GCCAAGCGTG ATGAGCTATT AGGGAATGCC
CTGGCCTTGT TACATCCTAT TCATTTTAAC GAACCCTTTG GTTTGAGCGT AATTGAAGCC
ATGGCTTGTG GTACTCCCGT AATTGCCTTT AATAAAGGCT CCATGCCGGA AGTAATAAAA
GACGGGGAGA CTGGTTTTTT GGTGGATAAT GTTGAAATGG CCTGCGAAAA ACTGGGCAGC
ATTAATAAAA TAAAACGAGC CAACTGTCGT TACTGGGTGG AAGAAAACTT TAGCCAGGAG
AGAATGGTTA GCGATTATCT ATCTCTTTAT CAAGAAATCA TTAAAGGAGG AAAGCTCCCG
GTTCGAACTC CCTCCCTATC AGGTAGATGT AAATAG
 
Protein sequence
MKVALLSPIA WRTPPRHYGP WERVVSLIAE GLVKKGVDVT LFATGDSKTA GRLEYICPIP 
YEENPNMDAK VWEAMHIAHL FEQAHKFDII HNNYDFLPLS YSRQVDTPMI TTIHGFSSPK
ILPIYREYNR NNYYVSISNA DRSPDLDYYA TVYHGIDLNE LTLKLNAGSY LLYFGRIHPD
KGTAQAIEIA RKSDMQLLIA GIIQDKQYFN QQIYPRIDNK KVIYLGSVGP AKRDELLGNA
LALLHPIHFN EPFGLSVIEA MACGTPVIAF NKGSMPEVIK DGETGFLVDN VEMACEKLGS
INKIKRANCR YWVEENFSQE RMVSDYLSLY QEIIKGGKLP VRTPSLSGRC K