Gene Swol_1862 details

Gene Information

• Locus tag: Swol_1862
• ID: 4283478
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Syntrophomonas wolfei subsp. wolfei str. Goettingen
• Kingdom: Bacteria
• Replicon accession: NC_008346
• Strand: +
• Start bp: 2126420
• End bp: 2126860
• Gene Length: 441 bp
• Protein Length: 146 aa
• Translation table: 11
• GC content: 46%
• IMG OID: 638138745
• Product: hypothetical protein
• Protein accession: YP_754531
• Protein GI: 114567377
• COG category: [O] Posttranslational modification, protein turnover, chaperones; [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG1585] Membrane protein implicated in regulation of membrane protease activity

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 0.0801977
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGTCTTCTT TGCAGTGGAT TTTGATAGCT GTAGTCTTTG GAGCCATTGA AATCTTTACC 
GTTGGTCTCT GGTTTCTCTG GCTAGCTCTT TCTGCATTGC TGGTGGCAGC CGCTGCTGCC 
TTGAAACTGC TGCCTGGCTT GGAGGTCCAG CTGCTCTTAT TTGCTTTTTT TACTCTTCTC 
TTCATTCTAT TTACCCGGCC TTTAGTGCTG AAATTCTTTA AAACCAATGA TACCGCCAGC 
AATGTCAAGG CTTTGGTAGG CCAACATGGA ATATGCCTTA GTAGTATCAC CCCTCTGGAA 
TATGGGCAGG TTAAAGTCAA TGGTGAAGTG TGGACAGCAT TTTCCCCGCA AGAAATTGAG 
GAAGATACCC GCATTGTGGT TGCTGGAATT GACGGGGTTA AGCTCTTAGT GGAAAAAGCC 
GAACTGGAAA CAAGCAAGTA A 

 

Protein sequence

MSSLQWILIA VVFGAIEIFT VGLWFLWLAL SALLVAAAAA LKLLPGLEVQ LLLFAFFTLL 
FILFTRPLVL KFFKTNDTAS NVKALVGQHG ICLSSITPLE YGQVKVNGEV WTAFSPQEIE 
EDTRIVVAGI DGVKLLVEKA ELETSK