Gene Swol_1717 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwol_1717 
Symbol 
ID4282699 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophomonas wolfei subsp. wolfei str. Goettingen 
KingdomBacteria 
Replicon accessionNC_008346 
Strand
Start bp1955604 
End bp1957493 
Gene Length1890 bp 
Protein Length629 aa 
Translation table11 
GC content54% 
IMG OID638138594 
Producthypothetical protein 
Protein accessionYP_754386 
Protein GI114567232 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGATCTA CCTGGATAAC TCCTCACCCC TCACCCCTCA CTTTACAATA CGGGGAGGAG 
AAAACCTTGT CGTTGCTTAA CCCGGCAGGC CTTGGCTTTG CCGCTATAAT TCCGCTGATA
ATTCTGCTAT ATCTTCTTAA AAGGCGTTTT CAGGAAAAAG TTATTTCCAG CACCTACCTC
TGGGAAGAGG TCTTGAAGGA TATGGAGGCC ACTACCCCCT GGCAGCGTTT GAAGAAGAAC
CTGCTGCTTT TCCTGCAGCT GCTGGCGGCC TTCTTGCTGG TAATGGCCCT GAGCCGCCCC
TACCTTCCGG TAGCCGGGGG CCTGGAGAAG CAGCTGCTGG TAGTACTCGA TGCTTCCGCC
AGCATGATGG CCAGTGATGT GACGCCATCC CGCTGGGGAA TGGCCCAAAA AGAGGTGGAG
AAGCTCATCG ACCGGCTGGG CCCGGGGGAG AAGATGACCC TTATCAAAAT GGGAGAGCAG
CCGGAAGTCC TGCAGGCGGC GAGTGGCGAC AAGAATGAGT TGCGCCGGTC TTTACGAGAT
GCGCAGCTGA AGACGGGACG GGCTGACCTG GAAGCAGCCC TTTCCTTAAT TGCTTCACTT
AGTCGTGATT CCCGGGATAT TATGCTGCTT ATAGTCAGCG ATGGCAAAAC CTTGCCGGTG
GAGCATGACC CCAGAATCAA ATGCCCGGTG GAGTTTATCC AAATTGGCCG GGAGAGTGAC
AACCTGGCCA TTACCACCCT GGCTACCCGC CGGGACTCGG GGCAGGTTCT GGCCCTGGCC
CGGGTGCAGA ATTTTGGTGA AAAGGCGGTA GTAAGCGATA TTGAACTCCG GGTCGATGGG
GAACTGTTCG ATATCAGGGA AATAAAGCTG GAAGCAGAAG GAGCCCGGGA GATAATCTGG
GAGGATTTGC CTGTGAGGGC AGAGAGTATT CAGGCTATTT TGCAACGGCC TGATTTCCTG
TTGGCTGATA ACGAAGCCTG GGCAGTGGTG GAGGAATTAA CGGAGAACCG GGCCCTGCTG
GTAAGCGAGG GGAATCTTTT CCTGGAAAAG GCTTTAAACC TCCTTCCGGG AATGGAATTA
TTCAAGACCA GTCCCGCTGA ATATGACCCC GCTCTCGCTG ATTATCAGTT GTTCATCTTT
GACGGCTGGC TACCTGCCCG CCTGCCCCAG GCTAGTATTA TAATAGTCAA TCCCCCTCCG
GGCAATCACT GGCTGGCCAT AAACGGTGAA GCGAAAAACC TCAGCGGGAT AAAAGCCGCC
GGGGAGGATT CCCTCCTGCG CTATATCGAT AGCAGTGACT GGCAAGTAGC CCGGAGTCAA
AAGCTGCTTT GCCCGGATTG GGCCAGAACC CTATTGGAAA GCGAAGATGT TCCTCTATTG
CTGACCGGGC AGTTATCGGG CCGGGTGGCT ATTTTCTCTT TTGATCTGCA TGAGAGCAAT
ATCCCTTTGC AAACCGGTTT CCCCATCTTA GTGCACAATT TAGTAGGCTG GCTCTTGCCC
GGGAATGCCG GAGCAAGTTT TGATCTGAAT CGCAGCCGCA TTAGTTTTGA CCCCCACCCG
GAAGCGGAAG CGATATACTT GCAGAGGCCG GGGGAAAAAG AGGAGCGATA TTTGCCTCCT
TTTCCGCGCT CTTTCAGTGC CAGTCGTCCG GGCCTGTACC AGATAAACCA GGTTCTAAGC
GATAGGATAG AGATAAGTTT CCTGGCCAGG AACCAGGGTG ACCCTCTGGA ATCAGATATA
AAGCCAGCCG CACTGCCCTG GCAGGCGCTG GAAGCTGACA GCAGGGGCGG GGGGGAGCGG
CTGGGCAAAA AAGAACTCTG GCCCTGGCTG TGCTGGGCAG TTCTGCTTTT GCTCTTGCTG
GAATGGGAGG TGTACCGCCG TGGTTATTAA
 
Protein sequence
MRSTWITPHP SPLTLQYGEE KTLSLLNPAG LGFAAIIPLI ILLYLLKRRF QEKVISSTYL 
WEEVLKDMEA TTPWQRLKKN LLLFLQLLAA FLLVMALSRP YLPVAGGLEK QLLVVLDASA
SMMASDVTPS RWGMAQKEVE KLIDRLGPGE KMTLIKMGEQ PEVLQAASGD KNELRRSLRD
AQLKTGRADL EAALSLIASL SRDSRDIMLL IVSDGKTLPV EHDPRIKCPV EFIQIGRESD
NLAITTLATR RDSGQVLALA RVQNFGEKAV VSDIELRVDG ELFDIREIKL EAEGAREIIW
EDLPVRAESI QAILQRPDFL LADNEAWAVV EELTENRALL VSEGNLFLEK ALNLLPGMEL
FKTSPAEYDP ALADYQLFIF DGWLPARLPQ ASIIIVNPPP GNHWLAINGE AKNLSGIKAA
GEDSLLRYID SSDWQVARSQ KLLCPDWART LLESEDVPLL LTGQLSGRVA IFSFDLHESN
IPLQTGFPIL VHNLVGWLLP GNAGASFDLN RSRISFDPHP EAEAIYLQRP GEKEERYLPP
FPRSFSASRP GLYQINQVLS DRIEISFLAR NQGDPLESDI KPAALPWQAL EADSRGGGER
LGKKELWPWL CWAVLLLLLL EWEVYRRGY