Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swol_1687 |
Symbol | |
ID | 4282087 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
Kingdom | Bacteria |
Replicon accession | NC_008346 |
Strand | - |
Start bp | 1914570 |
End bp | 1915706 |
Gene Length | 1137 bp |
Protein Length | 378 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 638138564 |
Product | periplasmic binding protein |
Protein accession | YP_754356 |
Protein GI | 114567202 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.372146 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCGAGTC AGAGAATCGT CACTGACTTA TGGAGAGGAG GAATAAAGTT GAAAAGAAAG CGAAGCTATA TAATCTTTCT GAGCATACTG GCTTTGCTGC TGTCTTCTGG TTTGGCTGGC TGCAACAAAG AAAAGACGCA GGAAACAGTG GTGCCAGCAG AGCCCGGTAT GCGTACAGTT GTGGATATGG CGGGACGGGA AGTTAGTGTA CCCAAACAAA TCAAAAAGGT GTTTTCCACC AACCCGCCGG GGACTATCTT GCTTTATACC ATGGATCCCG AGTTGTTAAT TGCCTGGAAC TACTACCTGG GAGAGGCGGA GAGAAAGTTT ATCCTTCCCC AGTACCATGA ATTGCCCAAC CTGGGTGGTT GGATGGCTAA AACTACCTGC AATACCGAGG AATTATTAAA AATAGGGCCG GATTTGATTC TCTATATGGG TGATATTAAT GATATGAGCA AATCTCAAGC CGACGATATT CAAAAACAGG TCAACATCCC AGTTGTTATG GTAAATGGCG ATCTTACTAA AATGGATGAA ACTTATGATT TTACCGGCAA GCTTCTAAAT ATGGAAAAAC AAGCTGAATT ACTGGGCAGC TATTGCCGGG AAACGGTAAA ACAGGTGCAA GCCAAAAGCA AAAATATTGC TGAGGATAAG CGAGTGCGGG TGTATTATGC CGAGGGTGCC AGCGGCTTGG AGACTGATCC TTGTGGCTCC CGCCATACCG AGGTTTTGGA TATGGTGGGT GGAGTTAATG TGGCTGATGT AATTGCCAAA GGGGAGCGCG GCATGACCCA GGTTTCCCAT GAACAAGTAC TGTTATGGAA CCCCGACCTG ATTATTTGCT GGGGACAGTG TTTTAAAGAA ATATTTAGTG ATAGCAAGTG GCAGAACATA AAGGCCGTAC AGGACCAAAA AGTCTATATG GTGCCCAGTG GTCCCTTTAA TTGGTTTGAT CGTCCGCCTT CGGTAAATCG TATACTGGGT CTGAAATGGC TGGGGAACTT GCTTTATCCC GAGGTATATG CTTACGATAT AGCTAAAGAA ACCCGGGAGT TTTACCAAAA GTTTTATCAT TATGATCTTA CGGATGAGGA TATAACTTTT CTGTTAAAGG ACTCCGGTGG CAAGTAG
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Protein sequence | MASQRIVTDL WRGGIKLKRK RSYIIFLSIL ALLLSSGLAG CNKEKTQETV VPAEPGMRTV VDMAGREVSV PKQIKKVFST NPPGTILLYT MDPELLIAWN YYLGEAERKF ILPQYHELPN LGGWMAKTTC NTEELLKIGP DLILYMGDIN DMSKSQADDI QKQVNIPVVM VNGDLTKMDE TYDFTGKLLN MEKQAELLGS YCRETVKQVQ AKSKNIAEDK RVRVYYAEGA SGLETDPCGS RHTEVLDMVG GVNVADVIAK GERGMTQVSH EQVLLWNPDL IICWGQCFKE IFSDSKWQNI KAVQDQKVYM VPSGPFNWFD RPPSVNRILG LKWLGNLLYP EVYAYDIAKE TREFYQKFYH YDLTDEDITF LLKDSGGK
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