Gene Swol_1671 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwol_1671 
Symbol 
ID4282371 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophomonas wolfei subsp. wolfei str. Goettingen 
KingdomBacteria 
Replicon accessionNC_008346 
Strand- 
Start bp1897658 
End bp1898110 
Gene Length453 bp 
Protein Length150 aa 
Translation table11 
GC content40% 
IMG OID638138548 
Productlarge conductance mechanosensitive channel protein 
Protein accessionYP_754340 
Protein GI114567186 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1970] Large-conductance mechanosensitive channel 
TIGRFAM ID[TIGR00220] large conductance mechanosensitive channel protein 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0394869 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTGGAAAG AATTTCGTGA GTTTGCCATG AGGGGAAATG TCATTGATCT GGCCATTGGT 
ATCATTATTG GAGCTGCATT TGGTAAAATC GTAACCTCAT TTGTTAATGA TATTTTAATG 
CCACCCATAG GATTGTTGTT AGGTAAGGTT GATTTTACGA ACCTCTATAT AAACCTCTCC 
GGAAAAAACT ATTCCTCTCT GGCTGATGCA ACGGCGGCGG GAGCACCCGT TATTAAATAC 
GGTGTTTTTC TTAATAGTAT CATTGATTTT ATAATCGTAG CTGTTGCTAT TTTTTTGGTG 
GTTAAGCAAA TCAATCGCCT GAAAAAACAA GAAGTTGCTG CTGCGCCAAC TACGAAAGAA 
TGTCGTTATT GCAAGTCGGA GATATCGATT GCTGCAACTC GCTGTCCCTT CTGTACATCT 
GAATTACTTG ATACAGGCAG GCCTCTGAAG TAA
 
Protein sequence
MWKEFREFAM RGNVIDLAIG IIIGAAFGKI VTSFVNDILM PPIGLLLGKV DFTNLYINLS 
GKNYSSLADA TAAGAPVIKY GVFLNSIIDF IIVAVAIFLV VKQINRLKKQ EVAAAPTTKE 
CRYCKSEISI AATRCPFCTS ELLDTGRPLK