Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swol_1638 |
Symbol | |
ID | 4282557 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
Kingdom | Bacteria |
Replicon accession | NC_008346 |
Strand | - |
Start bp | 1863063 |
End bp | 1865174 |
Gene Length | 2112 bp |
Protein Length | 703 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 638138515 |
Product | peptidoglycan glycosyltransferase |
Protein accession | YP_754308 |
Protein GI | 114567154 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0768] Cell division protein FtsI/penicillin-binding protein 2 |
TIGRFAM ID | [TIGR03423] penicillin-binding protein 2 |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0646938 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAAAGCG ATGAGTTCAA AAAACGCTTA AAAATATATA CAGCTGTAGT CATTGCATTG TTGGTTATAC TCGCTATCAG GCTGGCCATT GTGCAATTGT TTTTTAACGA GGTATACCAA ACCCAGGCCA AAGACAACCG CATTCGATTG GTGGCCATAA AGGCTCCACG AGGGGAAATA TATGAACGCA ATGCCAATAT ACTGGCTGCT AACAAATTGG TATATACGCT TTCCCTTACT TTCCTGCAAT TGGGAGATCA GCAGCAGGTA ATTAATAATC TGGTGAGCCT GGTACAGGAT TATTATCCCG ATATGACCTC CGATTTTATT GAAGATAAAA TTGAAAAGCA AAAATTCCGC CTGTTTGAGC CGGTAATTAT TATACGGGAT ATACCCTGGG AATTGGTGGT GAAATTGGAG GAAAACCGAC GGGATTTGCC AGGAGTATCC GTGGTAGTGG AACCCTTGCG TTACTACCCG CAAGCAGCAT TAGCAGGCCA TGTATTGGGT TACATTCACT CCATAAATTC GGAGGAATTG GCCCGGGTAG AGGCGAGCAA ATACAGTATT AACAGCCTGA TTGGCAAATC AGGTATTGAA AAACAATATG AGCAGTACCT ACGGGGTAAA GACGGTGCCC GGCAAGTGGA AGTCGATGCC CGGGGACGTC CGATACGAGA ACTGGTTACC CTGGAACCTT CACCCGGAAA TAATCTCTAT CTTACATTGG ATATGAAGCT GCAGAGGGTA CTGGAAAAGA GTATGGCTGA TACCTTGAAA CGCTTGCAAG TCAAGTATCC CAAGGCTCGG GTCGGTTCGG CTGTAGTACT GAATGTTAAA ACCGGTGAGA TTCTGGCTAT GTGCAGTGAT CCTCCCCTGG ACCCCAATGA CTGGAAGGGA AATCTCAGCC TGCAACGAGT ACCCTACTAT TTTCCCCAGG GTAATGCCTA TAATCCTATG GAACCAGGAG CCGAGGTGAA TCGTGCCCTG CAATCTACTT ATCCGCCCGG TTCCACTTTT AAGCCGGTAA CCGGCATGGC GGCTCTGGAA AAAGGGGGAG TTGATCCTTT AAAAAGCCTG GTTAATTGTA AGGGTGCCTA TTGGATAGCT CCATATATCC CTTGTACGGG AGTACATGGC AATGTCAACT ATTATACTGG TATGGCCACC TCCTGCAATA CCTTTTTTCA GGAAATGGGC CGGAGGGCAG GCAAAGACGC CATAGTATGG GTGGGCAGGC AGTTTGGATT AGGGGCCAAA ACCGGTATTG ACCTTCCTGA TGAGGAAAGC GGTCTTTTAC CTTCACCCGA ATGGAAGAAG GAAAAATATG CTCGGATTGT TGACAAGAAG TACGAAGTAT TGCAAAAGCA ATTGGCACAA AAATACGAAG AGTTATTGGC GGAAGCTCAG GATGATGAGC AGAAGCGTAG TTTGGAAAAA AAGCTTAAAC AGGAAAAGAT TAAGCTGGAA GCCCAGTATG AAATAGATTA TGGCTTTGAA ACTAAGTGGC AGGCTTTCGA TACTTTCAAT ATGTCTATTG GCCAGGGCGA CAACGATTAT ACCGTAATCC AGCTAGCTAA CTACGTGGCC ACCATAGCCA ATGGAGGTCA TTTAATGAAG CCTTATCTAG TTAGTCGCAT AGTTTCACAT GATAATAGAG TTTTAAAGGT TTTTCATCCT CAACTTATAC ATGATGTAGA ACTAAAGGCG GAAAGCATAA GGGAAACCCA GAAAGCTATG CTGGCTGTTA CCCAGCCGGG TGGTACGGCT CACTTTCTTT TTTATGATTT TCCCAAAGAC ATAGGAGTAG CTGCTAAAAC CGGAACCGCC CAAACAGGGC GTGCTGGAGA TAATCAATTA AAAGAATTTC ACGGGGTATT TGTGGCTTTT GCTCCTTATG ATGATCCGGA AATCGCTTTT GCCGGGGTGG TGGAATATGG CCACCATGGA AGTGAATCAG CCGGTTATGT GGCCAGGGAT ATATTTGAAC ATTATTTTGG TTTAAAGGAT CACCTGGCAG CAGATGAGGC AGATAAGGCG AAAGTGGCAG ATAAAATAAT CGAAGCTGAA GCAGCAGTGG AAAATGCAAT TGACGGCCAG CCAATAGAGT AA
|
Protein sequence | MKSDEFKKRL KIYTAVVIAL LVILAIRLAI VQLFFNEVYQ TQAKDNRIRL VAIKAPRGEI YERNANILAA NKLVYTLSLT FLQLGDQQQV INNLVSLVQD YYPDMTSDFI EDKIEKQKFR LFEPVIIIRD IPWELVVKLE ENRRDLPGVS VVVEPLRYYP QAALAGHVLG YIHSINSEEL ARVEASKYSI NSLIGKSGIE KQYEQYLRGK DGARQVEVDA RGRPIRELVT LEPSPGNNLY LTLDMKLQRV LEKSMADTLK RLQVKYPKAR VGSAVVLNVK TGEILAMCSD PPLDPNDWKG NLSLQRVPYY FPQGNAYNPM EPGAEVNRAL QSTYPPGSTF KPVTGMAALE KGGVDPLKSL VNCKGAYWIA PYIPCTGVHG NVNYYTGMAT SCNTFFQEMG RRAGKDAIVW VGRQFGLGAK TGIDLPDEES GLLPSPEWKK EKYARIVDKK YEVLQKQLAQ KYEELLAEAQ DDEQKRSLEK KLKQEKIKLE AQYEIDYGFE TKWQAFDTFN MSIGQGDNDY TVIQLANYVA TIANGGHLMK PYLVSRIVSH DNRVLKVFHP QLIHDVELKA ESIRETQKAM LAVTQPGGTA HFLFYDFPKD IGVAAKTGTA QTGRAGDNQL KEFHGVFVAF APYDDPEIAF AGVVEYGHHG SESAGYVARD IFEHYFGLKD HLAADEADKA KVADKIIEAE AAVENAIDGQ PIE
|
| |