| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swol_1581 |
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| Symbol | |
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| ID | 4282185 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008346 |
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| Strand | - |
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| Start bp | 1800948 |
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| End bp | 1801973 |
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| Gene Length | 1026 bp |
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| Protein Length | 341 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638138460 |
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| Product | heat-inducible transcription repressor HrcA |
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| Protein accession | YP_754254 |
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| Protein GI | 114567100 |
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| COG category | [K] Transcription |
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| COG ID | [COG1420] Transcriptional regulator of heat shock gene |
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| TIGRFAM ID | [TIGR00331] heat shock gene repressor HrcA |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00115825 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACTCTGG ATGAAAGAAA AAGGAATATC CTGGGATCCA TTATCCGTGA CTATGTGGAA
ACGGCTGAAC CGGTAGGTTC CCGGGCTATG GTAAAAAAGC ATGATTTAAA AATAAGCGCA
GCGACAGTAA GAAATGAAAT GGCCGATCTT GAAGACATGG GCTACCTGGA GCAGCCGCAC
ACCTCCGCAG GTCGTATCCC TTCCGAAAGA GGCTTTCGTT ATTATGTGGA TTGCATGATG
GAAAAAGAGC CTCCCGGAGA GAGGGAATAC GCTTTATTGC AGCAATTATT TGAACAGAAT
ATAGAAGACT GGGAGCAGGT GATTTTAGGG ATTGCTCATT TTCTATCCCA GATGACCCGC
TATACTTCCT TTGTTATTGT TCCAGCAGTG AAATTCACTG AGTTTCGCAA CCTGCAACTG
CTTCCTCTGG ATCAAGGAAA AGCCCTGCTC TTGTTGGTAT GTGATATGGG GGTAATAATG
CATCGTATAA TTAGTATCCC TGAATTCATA TCATCCCAGG ATTTGCAGGC TATTACCGGC
TTGTTTAACC AGGCCTTCAT AGGCAAGCGA CTGGAGGAAG TAAAAAGAAG CGATTTGCAA
CTCATAAGGG AGAACCTCAG CCAGCGCCGT CAAATTATTG ATAATGCCCT GGAAGCTATA
GATAACCTGT TGCAAAACTC CCGCGATGAA AAAGTAATGG TCAGCGGAGC CCTCAATATA
CTTAATGAAC CTGAGTTTAA AGATATGGAT AAACTAAAAC GAATACTGAA TGTTTTGGAA
GAAGACGATT CGCTGCGACA GATTATTCCC GGGGAACTGG GAGAGGCAGT TGACATTAAG
ATTGGCCGGG AGAACCCGTT GGAAGAAATC AAGGAAATGA GTCTGGTGGT AGCAGGGTAT
AAGTCTTTTG GCGAGCTGGG TAAGATAGGA GTGATAGGCC CGGTGCGTAT GGAATACTGG
AAAGCCGTAG GTACGGTGGA AACGGTGCGG GATATTATAG AAGACTATCT TAAGGGCTTA
GGCTAG
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| Protein sequence | MTLDERKRNI LGSIIRDYVE TAEPVGSRAM VKKHDLKISA ATVRNEMADL EDMGYLEQPH
TSAGRIPSER GFRYYVDCMM EKEPPGEREY ALLQQLFEQN IEDWEQVILG IAHFLSQMTR
YTSFVIVPAV KFTEFRNLQL LPLDQGKALL LLVCDMGVIM HRIISIPEFI SSQDLQAITG
LFNQAFIGKR LEEVKRSDLQ LIRENLSQRR QIIDNALEAI DNLLQNSRDE KVMVSGALNI
LNEPEFKDMD KLKRILNVLE EDDSLRQIIP GELGEAVDIK IGRENPLEEI KEMSLVVAGY
KSFGELGKIG VIGPVRMEYW KAVGTVETVR DIIEDYLKGL G
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