Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swol_1560 |
Symbol | |
ID | 4282428 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
Kingdom | Bacteria |
Replicon accession | NC_008346 |
Strand | - |
Start bp | 1781684 |
End bp | 1782352 |
Gene Length | 669 bp |
Protein Length | 222 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 638138440 |
Product | deoxyribose-phosphate aldolase |
Protein accession | YP_754234 |
Protein GI | 114567080 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0274] Deoxyribose-phosphate aldolase |
TIGRFAM ID | [TIGR00126] deoxyribose-phosphate aldolase |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTGGCTA AATATCTTGA TTCCACTAAT TTGCAAGCTG CAGCCCGGGC CAGTGACATC GAATTGTTAT GTCAAGAAGC CCGGCAGTAC CAGATGGCGG CTGTTTGTGT TAATCCTTTC CGCCTGGAAC TGGCCTGCCA CCTCCTGAGT GGAACTCCGG TCAAGGCTTG TACGGTAATA GCTTTTCCCC TGGGAGCCGA TCATTGGACG AGTAAAGTGG ATTCAGCGCG GCGAGCCCTG CAAATGGGGG CGGCTGAACT TGATATGGTA ATGAATATTG GTGCTTTCAA GGATAAGGAT TTCCGCTTGG TGGAAAAAGA GATCAAGGAA TTGCTTCGTT TAAGGGAAGA ATATGTTTTT CTGCTCAAAG TTATCGTGGA AACAGCTTTG CTTAGCAAGG AGGAACTGCA GGATATAAGC GTTTTGCTAG GTAATAGCGA AGCAGATTTT ATTAAGACTT CTACTGGATT TTCCAGCCGG GGTGTTACCC TGGAGGATAT TGAGATTATT CGAGAATCCC GCCAAAGAAA GGATTTAAAG ATTAAAGCCA GCGGGGGCAT AAAGAGCCTG GATTTTGCCC TTGAATTACT AAAAGCAGGG GTTGACAGAA TAGGGAGCAG CAGTGCAGGG GCATTGCTGG AGGAGTACCG GCAAAGGGGA GGGCAGTAA
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Protein sequence | MLAKYLDSTN LQAAARASDI ELLCQEARQY QMAAVCVNPF RLELACHLLS GTPVKACTVI AFPLGADHWT SKVDSARRAL QMGAAELDMV MNIGAFKDKD FRLVEKEIKE LLRLREEYVF LLKVIVETAL LSKEELQDIS VLLGNSEADF IKTSTGFSSR GVTLEDIEII RESRQRKDLK IKASGGIKSL DFALELLKAG VDRIGSSSAG ALLEEYRQRG GQ
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