Gene Swol_1535 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwol_1535 
Symbol 
ID4281861 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophomonas wolfei subsp. wolfei str. Goettingen 
KingdomBacteria 
Replicon accessionNC_008346 
Strand+ 
Start bp1754729 
End bp1755208 
Gene Length480 bp 
Protein Length159 aa 
Translation table11 
GC content42% 
IMG OID638138415 
Productiron-dependent transcriptional repressor 
Protein accessionYP_754209 
Protein GI114567055 
COG category[K] Transcription 
COG ID[COG1321] Mn-dependent transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.35634 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAGAGC AAGGGCGCGA GTTTCGCACT GTCCGGGGCT ACCAAATTAA GCAACAGGCA 
ACTAAAACTA TTACCGCCAG CATGGAAGAT TATCTGGAAA TGATCTACCG CCTGGCTGGT 
AAAAAGGGAT ATACCCGTAT GGGTGATCTG GCATCAGCCC TTAATGTGCA ACCTCCATCG 
GCCAGTAAAA TGGTACAGAA GCTGGCGGAT ATGGGTTACC TGCAGTTTGA AAAGTATGGT 
GTGATAGAAC TAAGCAAAAA GGGGCAGGAA CACGGGCAAT ATTTGTTAAA AAGGCATGAG 
ACTCTGGAAC GCTTTTTAAG CATTATAGGG GTTAAAGAGC AATTGTTGGA GGAAACTGAA 
AAAATTGAAC ATTATATCAG TCCGGAAACT ATAGGAAAAA TTATGCTGCT GGTCGAATTC 
ATGGAGAATA ATTTCGAATG GAAACAAGCT TTTTACGAAT TTCAAAAGCA TGAGGGTTGA
 
Protein sequence
MEEQGREFRT VRGYQIKQQA TKTITASMED YLEMIYRLAG KKGYTRMGDL ASALNVQPPS 
ASKMVQKLAD MGYLQFEKYG VIELSKKGQE HGQYLLKRHE TLERFLSIIG VKEQLLEETE 
KIEHYISPET IGKIMLLVEF MENNFEWKQA FYEFQKHEG