Gene Swol_1500 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwol_1500 
Symbol 
ID4282115 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophomonas wolfei subsp. wolfei str. Goettingen 
KingdomBacteria 
Replicon accessionNC_008346 
Strand
Start bp1718363 
End bp1719208 
Gene Length846 bp 
Protein Length281 aa 
Translation table11 
GC content43% 
IMG OID638138376 
Producthypothetical protein 
Protein accessionYP_754174 
Protein GI114567020 
COG category[S] Function unknown 
COG ID[COG1307] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR00762] EDD domain protein, DegV family 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.886569 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCAAGAAA AAATAGCCCT GCTATGTGAT AGCATGTGTG ACCTGCCTCG CGGCTTTATT 
GAAAAATTTA ATATCAAGGT TATTTCCGCC AGAGTAATCT ATCCCCAACA AGAATATATC
GACCGGGTGG ATATTCAACC CGAAGAGGTT TATGCCCGTA TGCCTCAGGA AATTCCTACC
ACGTCTATGC CACCATTACA AGAAATCAAA GAGATCTTTG AAAAAATTCG TAGCGAAGGC
TTTACTCATG TACTGGCTGT TCACATCTCC AGCGGGCTTT CAGGAACCTC TCAGGCCGTC
AAGCTTATCG CTAAAGACAT TAAAGACATG AAAGTAGAAG TGATTGATAC CAAAACTCTA
TCCATGGGAA CCGGCTGGTT GGTGCTGGAC GCTGCCCGCA ATATTGCCAA TGGATGGAGC
TTTGAGAAAA CACTGGAAAA CCTGAAGAAA CTGCAAAATA AAATGCATCT TTATTATGTT
ATTGAAACCT TGGAATACCT GCGTCGTGGT GGAAGAATCG GGCTGGTTGC CAGCATGCTG
GGAGAATTTT TGCATCTGAA ACCTATCATC TCGGTTAACT TAGAAGGAAA ATATTTTACC
TTCTGTAAAG CTAAAGGACG AAAAAAATCC ATAGAGAAAC TTATTGAACT GGTGGAACAA
TCCACGAAGG ACAAACCCTT TAACCTGGCT ATTCTGCATG GGGGGGCCAA AGCGGAATGT
GAAGCTATTT TAGAAAGACT GCGTAATCTT CCCAATCTTA AGGAAGTAAT AACTTCAGAT
ATTAGCCCGG CACTCGGAGT ACACACTGGA CCAGGATTAC TCGGTGTGTG TTTTCACGAA
GTTTAG
 
Protein sequence
MQEKIALLCD SMCDLPRGFI EKFNIKVISA RVIYPQQEYI DRVDIQPEEV YARMPQEIPT 
TSMPPLQEIK EIFEKIRSEG FTHVLAVHIS SGLSGTSQAV KLIAKDIKDM KVEVIDTKTL
SMGTGWLVLD AARNIANGWS FEKTLENLKK LQNKMHLYYV IETLEYLRRG GRIGLVASML
GEFLHLKPII SVNLEGKYFT FCKAKGRKKS IEKLIELVEQ STKDKPFNLA ILHGGAKAEC
EAILERLRNL PNLKEVITSD ISPALGVHTG PGLLGVCFHE V