Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swol_1500 |
Symbol | |
ID | 4282115 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
Kingdom | Bacteria |
Replicon accession | NC_008346 |
Strand | + |
Start bp | 1718363 |
End bp | 1719208 |
Gene Length | 846 bp |
Protein Length | 281 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 638138376 |
Product | hypothetical protein |
Protein accession | YP_754174 |
Protein GI | 114567020 |
COG category | [S] Function unknown |
COG ID | [COG1307] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR00762] EDD domain protein, DegV family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.886569 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | TTGCAAGAAA AAATAGCCCT GCTATGTGAT AGCATGTGTG ACCTGCCTCG CGGCTTTATT GAAAAATTTA ATATCAAGGT TATTTCCGCC AGAGTAATCT ATCCCCAACA AGAATATATC GACCGGGTGG ATATTCAACC CGAAGAGGTT TATGCCCGTA TGCCTCAGGA AATTCCTACC ACGTCTATGC CACCATTACA AGAAATCAAA GAGATCTTTG AAAAAATTCG TAGCGAAGGC TTTACTCATG TACTGGCTGT TCACATCTCC AGCGGGCTTT CAGGAACCTC TCAGGCCGTC AAGCTTATCG CTAAAGACAT TAAAGACATG AAAGTAGAAG TGATTGATAC CAAAACTCTA TCCATGGGAA CCGGCTGGTT GGTGCTGGAC GCTGCCCGCA ATATTGCCAA TGGATGGAGC TTTGAGAAAA CACTGGAAAA CCTGAAGAAA CTGCAAAATA AAATGCATCT TTATTATGTT ATTGAAACCT TGGAATACCT GCGTCGTGGT GGAAGAATCG GGCTGGTTGC CAGCATGCTG GGAGAATTTT TGCATCTGAA ACCTATCATC TCGGTTAACT TAGAAGGAAA ATATTTTACC TTCTGTAAAG CTAAAGGACG AAAAAAATCC ATAGAGAAAC TTATTGAACT GGTGGAACAA TCCACGAAGG ACAAACCCTT TAACCTGGCT ATTCTGCATG GGGGGGCCAA AGCGGAATGT GAAGCTATTT TAGAAAGACT GCGTAATCTT CCCAATCTTA AGGAAGTAAT AACTTCAGAT ATTAGCCCGG CACTCGGAGT ACACACTGGA CCAGGATTAC TCGGTGTGTG TTTTCACGAA GTTTAG
|
Protein sequence | MQEKIALLCD SMCDLPRGFI EKFNIKVISA RVIYPQQEYI DRVDIQPEEV YARMPQEIPT TSMPPLQEIK EIFEKIRSEG FTHVLAVHIS SGLSGTSQAV KLIAKDIKDM KVEVIDTKTL SMGTGWLVLD AARNIANGWS FEKTLENLKK LQNKMHLYYV IETLEYLRRG GRIGLVASML GEFLHLKPII SVNLEGKYFT FCKAKGRKKS IEKLIELVEQ STKDKPFNLA ILHGGAKAEC EAILERLRNL PNLKEVITSD ISPALGVHTG PGLLGVCFHE V
|
| |