Gene Swol_1473 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwol_1473 
Symbol 
ID4282338 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophomonas wolfei subsp. wolfei str. Goettingen 
KingdomBacteria 
Replicon accessionNC_008346 
Strand- 
Start bp1691364 
End bp1692380 
Gene Length1017 bp 
Protein Length338 aa 
Translation table11 
GC content48% 
IMG OID638138351 
Productiron(III) ABC transporter, permease protein 
Protein accessionYP_754149 
Protein GI114566995 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0609] ABC-type Fe3+-siderophore transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGGTATTA CGAAAAAGAG AATTATTTAT TTGTTATTAA TAATATCTCC TTTGCTTTGC 
ATTTTTGTTT CCCTTTTTAT TGGCAGGTAT CCGCTTTCCA TAGACGAAGT AATCCGTATT 
CTATGGTGTA AAACGGCCCA ACTGCCGTGC GAGGTTCTGG ATATTAAGCA GACTATAGTC 
TGGGATATTC GATTGCCCCG GGCCATACTG GGAGCCCTGG TGGGAGGATG CCTGGCTATT 
AGTGGAGCGG CTTTTCAGGG ATTATTCCGT AATCCCCTGG TCAGTTCCGG TATTCTGGGG 
GTAAGCTCCG GGGCCGGTTT TGGTGCGGCT CTGGCCATAG TAATGTTTAG CAGCGTATCG 
TCCGCTACCT ATATTTTTGC TTTTGCTTTT GGTACATTGG CGGTATTCTT AAGCTATATA 
ATCGGCAGGG TCTATGATAC CACTCCAACT ATAATGCTGG TTCTGGGAGG GGTGATAGTA 
TCATCAGTAT TTTCTGCTCT TATCTCCTTG CTGAAATATG TGGCTGATCC CTATCAGCAA 
TTGCCCGCCA TAGTTTTCTG GCTAATGGGT AGTTTGGCTA CGGCCAGGTA TAGTGATATT 
GTGGCGGCTG GGTTGCCGAT GCTGGTGGGA ATTGCCGGTC TTTTGGCTAT ACGCTGGAGG 
ATTAATGTTT TATCCATGGG GGATAAGGAG GCGCATACCC TGGGGGTAAA CCTGGCGGTG 
GATAAGGGAC TGGTAATAAT ATCTGCCACT CTAGCCACGG CAGCGGCGGT TTCAGTTAGC 
GGGATCATCG GTTGGGTAGG ATTGGTTATT CCCCACATCT GCCGTATGTT AGTAGGAAAC 
GATAACCGGG TATTGATTCC GGCCAGTCTT TCCATGGGAG CCTGTTTTCT TATACTGGTA 
GATGACCTGG GTCGGATTAT AACTGGTTCG GAAATGCCTC TGGGTATCTT GACTGCGCTG 
GTGGGAGGCC CGTTTTTTGT ATGGCTGCTT AAGAAAACCA AAGGGGGCAA CTGGTAA
 
Protein sequence
MGITKKRIIY LLLIISPLLC IFVSLFIGRY PLSIDEVIRI LWCKTAQLPC EVLDIKQTIV 
WDIRLPRAIL GALVGGCLAI SGAAFQGLFR NPLVSSGILG VSSGAGFGAA LAIVMFSSVS 
SATYIFAFAF GTLAVFLSYI IGRVYDTTPT IMLVLGGVIV SSVFSALISL LKYVADPYQQ 
LPAIVFWLMG SLATARYSDI VAAGLPMLVG IAGLLAIRWR INVLSMGDKE AHTLGVNLAV 
DKGLVIISAT LATAAAVSVS GIIGWVGLVI PHICRMLVGN DNRVLIPASL SMGACFLILV 
DDLGRIITGS EMPLGILTAL VGGPFFVWLL KKTKGGNW