Gene Swol_1431 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwol_1431 
SymbolruvB 
ID4282922 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophomonas wolfei subsp. wolfei str. Goettingen 
KingdomBacteria 
Replicon accessionNC_008346 
Strand- 
Start bp1640899 
End bp1641933 
Gene Length1035 bp 
Protein Length344 aa 
Translation table11 
GC content50% 
IMG OID638138311 
ProductHolliday junction DNA helicase RuvB 
Protein accessionYP_754109 
Protein GI114566955 
COG category[L] Replication, recombination and repair 
COG ID[COG2255] Holliday junction resolvasome, helicase subunit 
TIGRFAM ID[TIGR00635] Holliday junction DNA helicase, RuvB subunit 


Plasmid Coverage information

Num covering plasmid clones2 
Plasmid unclonability p-value0.00000941483 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGGACG AGAGACTTAT TTCTTCTCAT CTACTGGACG AAGATGATAA CAACGAAAAT 
TCAATACGGC CCGGGCGCTT ATCCGAATAT ATTGGACAGG AAAAGGTAAA GGAAAATGTA 
GAGGTATTTA TCACTGCTGC GCGGGAACGG AAGGAAAGCT TGGATCATGT CCTTCTCAGC 
GGTCCCCCGG GACTGGGCAA GACCACTCTG GCCAGCATAA TAGCCAACGA AGTCGGCAAG 
CCCATTCGCA AGACCTCGGG ACCAGCCATT GAGAGACCGG GAGACCTGGC GGCTATTCTT 
ACCAATTTGG AACCGGGCGA AGTTCTGTTT ATTGATGAAA TTCACCGGCT AAACCGTAAT 
GTAGAAGAGA TAATGTACCC GGCTATGGAA GATTACGTCA TAGATATAAT TATCGGCAAA 
GGCCCGGCAG CCCGCACTCT TCGCCTGGAC CTTCCGCCAT TTACCTTGAT TGGAGCTACT 
ACCCGACCCG GGCTTTTGAG TTCTCCCTTG CGCGACCGTT TTGGTATAAG CTGCCGACTG 
GATTTCTATA CCCCGCTGGA GCTAAGCGAG ATAATCCTTA GGGCAGCCCG AATTCTGGAG 
ATTAGTCTAG ATAAGGAAGG AGCCACGGAA ATAGCCGGGC GTTCCCGGGG AACGCCGCGG 
GTGGCCAATC GTTTGCTGCG GAGAGTAAGA GACTACGCTT TGGTCAAGGG TAATGGAAAT 
ATTGATTTTT CTCTGGCCAA ATGGGCCTTG GAGATGCTGG AAATAGATGA ATGTGGATTG 
GATGTAATGG ATAGAATGAT TTTGGAAGCA ATTATCGGCA AGTTCAGCGG GGGACCGGTA 
GGCTTGGATA CCCTGGCGGC TTCAGTTTCG GAAGAATCTG ATACCATTAG CGATGTTTAT 
GAACCCTATC TCTTAAAGCT AGGCTTTATC CAGAAGACTC CCCGGGGGAG GATGGCTACT 
GAGCATGCCT ACCGTCATCT GGGCTATCCG CTGAAAGGGA ATTTGGAGGG AAAAGGGCTG 
TTTTCGGATG CATAG
 
Protein sequence
MLDERLISSH LLDEDDNNEN SIRPGRLSEY IGQEKVKENV EVFITAARER KESLDHVLLS 
GPPGLGKTTL ASIIANEVGK PIRKTSGPAI ERPGDLAAIL TNLEPGEVLF IDEIHRLNRN 
VEEIMYPAME DYVIDIIIGK GPAARTLRLD LPPFTLIGAT TRPGLLSSPL RDRFGISCRL 
DFYTPLELSE IILRAARILE ISLDKEGATE IAGRSRGTPR VANRLLRRVR DYALVKGNGN 
IDFSLAKWAL EMLEIDECGL DVMDRMILEA IIGKFSGGPV GLDTLAASVS EESDTISDVY 
EPYLLKLGFI QKTPRGRMAT EHAYRHLGYP LKGNLEGKGL FSDA