| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swol_1412 |
|---|
| Symbol | |
|---|
| ID | 4282716 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008346 |
|---|
| Strand | - |
|---|
| Start bp | 1624773 |
|---|
| End bp | 1625309 |
|---|
| Gene Length | 537 bp |
|---|
| Protein Length | 178 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 638138292 |
|---|
| Product | nucleoside recognition proteinn |
|---|
| Protein accession | YP_754090 |
|---|
| Protein GI | 114566936 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG0700] Uncharacterized membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.0809763 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCTTTTAA GCATTCTCAC CCTGATATCC AAATGGGCCA TCCCTTTTCT TCTTTTAGCT
GTGCCCCTTT ACGGCATGCT TAAAAAAGTT CCCGTTTATG AAAGCTTTGT AGAAGGTGCG
GAACAGGGCT TTTATACGGC AGTTAAAATC ATACCTTTTT TGGTGGGAAT GATGGTGGCT
ATTTCTGTTT TTCGTGCTTC CGGTGCTATG GACTACCTCA GCCGGGCTGT TGCCCCCTTG
ACCGCCCTCA TTGGCGCTCC TTCTGAAATC CTTCCTCTGG CCGTAATGCG TCCCCTTTCC
GGCAGTGCTG TTCTGGGAAT GTCTACGGAA ATTATGAAAA TATATGGTCC GGATTCCCAT
ATTGGTCGAC TGGCTTCAGT TATGCAGGGA ACTACTGATA CTACTTTCTT TGTTTTGACG
GTATACTTCG GTTCGGTAGG GATTAAGAAA TACCGTTATG CTCTCCTGAC TGGTCTAACC
GCTGATATAA GCGGTTTTCT AGCTTCGGTG TATATATGCA ACCTGCTCTT CCGCTAA
|
|---|
| Protein sequence | MLLSILTLIS KWAIPFLLLA VPLYGMLKKV PVYESFVEGA EQGFYTAVKI IPFLVGMMVA
ISVFRASGAM DYLSRAVAPL TALIGAPSEI LPLAVMRPLS GSAVLGMSTE IMKIYGPDSH
IGRLASVMQG TTDTTFFVLT VYFGSVGIKK YRYALLTGLT ADISGFLASV YICNLLFR
|
|---|
| |