Gene Swol_1223 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwol_1223 
Symbol 
ID4282488 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophomonas wolfei subsp. wolfei str. Goettingen 
KingdomBacteria 
Replicon accessionNC_008346 
Strand- 
Start bp1413921 
End bp1414577 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content46% 
IMG OID638138098 
Productribulose-phosphate 3-epimerase 
Protein accessionYP_753903 
Protein GI114566749 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0036] Pentose-5-phosphate-3-epimerase 
TIGRFAM ID[TIGR01163] ribulose-phosphate 3-epimerase 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.797627 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGATACTAG TTGCTCCGTC AATACTATCC GCTAATTTTA CTCATCTGGG GGAAGATATC 
CGAAAAGTAG AAGAAGCTGG AGCCGATTGG TTGCATATAG ATGTTATGGA TGGTCATTTT 
GTACCCAACC TAACTATTGG GCCCCAGGTA GTAGCTGATA TTCGTTCCCG CTCAAAGCTG 
TTTTTTGATG TTCACCTGAT GGTAGAGAAA CCCGAATCCT TGATAGCTGT TTTTGTAGAA 
GCCGGCGCTG ACCTTTTAAC GGTACATTAT GAAAGCTGTC CCCATCTGCA CCGGGTGGTA 
CATATGATAA AAGATGCAGG AATTAAAGCA GGAGTAGCCC TTAATCCCGC TTCATCGATA 
ATGCTGCTGG AGAACATAAT TTCTGAACTG GATCTGCTTT TGCTAATGAG TGTTAATCCG 
GGTTTCGGGG GTCAGAGCTT TATTCCCGGA GTATTGGATA AAATTACTAA AGCCAGGAAA 
CTGCTGGAGA GCACTGGTTC TCCCGCTTAT CTGCAAGTAG ATGGAGGAAT AAATCTGGAA 
ACAGCAAGAC AGGTGGTGGA GGCAGGTTGC AATGTGCTGG TTGCCGGTTC CTATGTTTTC 
AAGTCCCCGG AACCGGGAGA AGCGGTGAAG AGTTTGAAAA ACCTCGGTAG CTCTTGA
 
Protein sequence
MILVAPSILS ANFTHLGEDI RKVEEAGADW LHIDVMDGHF VPNLTIGPQV VADIRSRSKL 
FFDVHLMVEK PESLIAVFVE AGADLLTVHY ESCPHLHRVV HMIKDAGIKA GVALNPASSI 
MLLENIISEL DLLLLMSVNP GFGGQSFIPG VLDKITKARK LLESTGSPAY LQVDGGINLE 
TARQVVEAGC NVLVAGSYVF KSPEPGEAVK SLKNLGSS