Gene Swol_1194 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwol_1194 
Symbol 
ID4282672 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophomonas wolfei subsp. wolfei str. Goettingen 
KingdomBacteria 
Replicon accessionNC_008346 
Strand
Start bp1381007 
End bp1382620 
Gene Length1614 bp 
Protein Length537 aa 
Translation table11 
GC content44% 
IMG OID638138067 
ProductgrkA; spore germination protein, GrkA 
Protein accessionYP_753874 
Protein GI114566720 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.616884 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAGGTT TTCTTTTCAA AAAACTACAT TTTAAAAGAA TGTCAAAAGA TATTCATAAA 
AAGGCTGCAG GACATTTTAA TTCCGCTGTC AGCCTGTCCA AAAACCTGGA GGAAAACCTG
AAGATTTTAA GGGAGGCTCT TGGTTCAAGC AATGATGTAA TCATTCGTGA GATAAAAATT
AGCCCCCATT CAAATGTTGA TGCGGCCGTT ATCTATATTG ATGGTTTAGT GGATAGAAAT
TTATTAAACC ATGATATTTT GCAACCATTG ATGTTTAACC TGCAAATGAT TAAGGATAAT
GCCAGCCATA ACCACACGAG CCTGATTGAT TATATTAAAT CAAGTGTGTT AAATGTAGGA
CAGATAACTG TAGTCCAGGA TATAGACAGA GTTATTGCCC AGGTTCTTAC AGGTCATATT
GCCATTTTGG CAGAAGGTGT AAGCCGGGCC CTGCTTATTG ATGCCAAGGG TTGGGAAACA
CGACGTATCG AAGAGCCTAA AAACGAGTTG TCGGTTCGAG GATCAAAAGA AAGTTTTACT
GAAACTCTGC GTACCAATAC AGCTTTGCTG CGGCGAAAAA TACGCGATCC TCATTTAACT
TTTCAGAGCC TGCAAATTGG GGAGCGGTCG AAAACCGATC TTTCAATTGT TTATATCAAG
GGTATCACCC CGGAAAACCT CATCGAAGAA ATCAATCAAC GGCTGCAACG AATAGATACT
GATACTATTT TGGATGTTAG TTACATAGAA CAATTCATTG AAGATAGCCC CAACTCGTTA
TTTCCCACCG TTGGCAGCAG TGAAAGACCA GATGTAGTGG TAGCCAGAAT ACTGGAGGGT
CGAGCCGCCA TATTGCTTGA TGGCTCCCCG ATGGCCCTGG TGGTACCCTT CTTATTTATT
GAAGGTTTTC AAAACCCGGA CGATTATTAC GCCCGGCCAT TTTTCGCTAC ATTGGTGCGG
TGGATTCGAT TGCTGGGTTA TTTGCTCAGT ATCTATTTGC CTGGTATTTT TGTTTCCTTA
AAAACTTTTC ATCCCGAATT ATTTCCTACC CAATTGCTGA TTTCGGTGGC GGCAGCGCGG
GAAGGGCTAC CTTTACCAGT TGTATTAGAA GCCCTGTTAA TGCTGCTCTT GTTCGAAATT
TTGCGGGAAG CCGGTCTCAG GATGCCCCGC TCACTGGGCC AGGCTGTCAG TATTGTAGGT
GCGCTGGTAA TCGGTCAGGC AGCAGTATCA GCTGGTTTAG TTGGAGCACC CATGGTAATA
GTAATAGCCA CTACAGCTAT TGCTTCATTT TTAGTCATCC CTTATGCTGA TTCGGGAACC
TTGTACCGCT TTATAATGAC GGTAGCGGGC GGTTTGCTGG GTTTATTTGG TATAGTTTTG
GTTTCCCTTG AAATGCTTAG CCACCTGGCT TCTCTACGCT CCCTGGGAGT AGCCTATTTA
TCGCCGGTAA CTCCACTCAA TATTCGTGGC CTGCGAGATA CTTTCATTCG GGCTCCCTTA
TGGGCCATGG ATAGCCGTCC CGCTTCTTTA GATTCACCCG ATACAAAGCG GCAATCATCC
GGTCAAATGC CTCGGCCTCC TAAAAGCAGC TCCCAGCAGG GGGATACTCA ATGA
 
Protein sequence
MSGFLFKKLH FKRMSKDIHK KAAGHFNSAV SLSKNLEENL KILREALGSS NDVIIREIKI 
SPHSNVDAAV IYIDGLVDRN LLNHDILQPL MFNLQMIKDN ASHNHTSLID YIKSSVLNVG
QITVVQDIDR VIAQVLTGHI AILAEGVSRA LLIDAKGWET RRIEEPKNEL SVRGSKESFT
ETLRTNTALL RRKIRDPHLT FQSLQIGERS KTDLSIVYIK GITPENLIEE INQRLQRIDT
DTILDVSYIE QFIEDSPNSL FPTVGSSERP DVVVARILEG RAAILLDGSP MALVVPFLFI
EGFQNPDDYY ARPFFATLVR WIRLLGYLLS IYLPGIFVSL KTFHPELFPT QLLISVAAAR
EGLPLPVVLE ALLMLLLFEI LREAGLRMPR SLGQAVSIVG ALVIGQAAVS AGLVGAPMVI
VIATTAIASF LVIPYADSGT LYRFIMTVAG GLLGLFGIVL VSLEMLSHLA SLRSLGVAYL
SPVTPLNIRG LRDTFIRAPL WAMDSRPASL DSPDTKRQSS GQMPRPPKSS SQQGDTQ