Gene Swol_1193 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwol_1193 
Symbol 
ID4282671 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophomonas wolfei subsp. wolfei str. Goettingen 
KingdomBacteria 
Replicon accessionNC_008346 
Strand
Start bp1379835 
End bp1381010 
Gene Length1176 bp 
Protein Length391 aa 
Translation table11 
GC content44% 
IMG OID638138066 
Producthypothetical protein 
Protein accessionYP_753873 
Protein GI114566719 
COG category 
COG ID 
TIGRFAM ID[TIGR02887] germination protein, Ger(x)C family 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGAGAA AACCGGGTTT GGTACTTATT TTGTTAATCA TTATTCCTGT AATCATATCC 
GGCTGTTGGG ATAGCATTGA GTTGAATAAA TTATCTATTA TATCCGGCCT GGGTTGGGAT
ATCAATGCAA AAACAGGAAA GGTTACCCTT ACCTTTCAAT CTATCATTCC CAGCGAGATA
AAGAGTGCTG GCGGCAGTAG CGGAGATGGG GGGCAAAAAA GGGGTGACCC ACTCCACACC
ATTCAATTGG ACTCCAGCAC CGGTTCATCA GCTTATGATG CCTTAAATCG CTATACCCAA
CATAGTAGTC GCAGAACATT CTATCAGCAT ACCCAGGTTT ATGTCTTTGG CCGCAGTGCT
GCTGAACAGG GTATCTATCC TTTCCTTGAT TCAATAGCCA GGAATCCGAT AAACCGCCCC
AATGTCCTGA TGGTAGTGGC CGAGAAAAAA GCCCGTGATA CTCTAAGGGT TGAGGATGGA
ATGGAAAACA TTCAGGCCAT CGGAATGGCT GCTCAGATTA AGCTATCAGC AGAATATTCC
CAATACCCGG TGGTCACCTA CCTGGAATTT GCCAACCGCT TAATTAGCGA AACTACCGCT
CCTCTTGCCC CTATGGTAGG CATCATTGAG CAAGCCGGTC CGGAAGGGGA TAGAGTACAA
AAAACTCGCA TAAGCGCAAC GGCCGTTTTT AAAAGAGACA GGATGATAGG GCAACTAAAT
GAAGAAGAAT CAAGGGGTCT TTTGTGGGCC ATTAACAAGG TCAAAAAAGG ATTTATAATA
ATCCCGGGAG CTAACCTGGA GATTGTTAGT GCCAAAAGTA AAATTATTCC TGAATTACAG
GACGAGAAAA TTAAAATTAC TATTACCATA GATGAAGAGT CCAACCTGCT GGAGTATGAT
GGTCACCGGG AGATAAGCTC CAACTTCCTG CAAGAATTGG AAAAGGGCCA GGCCCGGGAG
ATTGAGAGCC AGGTGATAGC AGCAGTTGAA AAATCCCGGA CTCTGAATGC CGATGTTTTT
GGCTTTGGGG AGGCGGTTCA TCGAAAATAT AAAAAAGAAT GGCCAGTTCT AAAAGCGAGA
TGGGAGGAAA TCTATCCCTA TATTGAGGTT GTGGTAAAGG TAAAAACTCA TGTAAATGAA
ATTGGGGAAA TTAATAAAGC ATTGATTAAA GATTAA
 
Protein sequence
MKRKPGLVLI LLIIIPVIIS GCWDSIELNK LSIISGLGWD INAKTGKVTL TFQSIIPSEI 
KSAGGSSGDG GQKRGDPLHT IQLDSSTGSS AYDALNRYTQ HSSRRTFYQH TQVYVFGRSA
AEQGIYPFLD SIARNPINRP NVLMVVAEKK ARDTLRVEDG MENIQAIGMA AQIKLSAEYS
QYPVVTYLEF ANRLISETTA PLAPMVGIIE QAGPEGDRVQ KTRISATAVF KRDRMIGQLN
EEESRGLLWA INKVKKGFII IPGANLEIVS AKSKIIPELQ DEKIKITITI DEESNLLEYD
GHREISSNFL QELEKGQARE IESQVIAAVE KSRTLNADVF GFGEAVHRKY KKEWPVLKAR
WEEIYPYIEV VVKVKTHVNE IGEINKALIK D