Gene Swol_1159 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwol_1159 
Symbol 
ID4283516 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophomonas wolfei subsp. wolfei str. Goettingen 
KingdomBacteria 
Replicon accessionNC_008346 
Strand
Start bp1341761 
End bp1342831 
Gene Length1071 bp 
Protein Length356 aa 
Translation table11 
GC content45% 
IMG OID638138032 
Producthypothetical protein 
Protein accessionYP_753839 
Protein GI114566685 
COG category[H] Coenzyme transport and metabolism
[R] General function prediction only 
COG ID[COG1060] Thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes 
TIGRFAM ID[TIGR00423] radical SAM domain protein, CofH subfamily 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.34532 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCCAATTA CTATTAGACA GCGACTAAAG GAGATTATGA ATGGGCGGCG TATGAGCGAT 
GAGGATTTTT TACTCTTGTA TGAGCAAGGA GAGCTTCTGG AGATAGGACA GGCTGCCAAC
CGAAAAAGAG AAGAAATATT TGGTAATAAC CAGGCTACTT TTGTTATTGA CCGCAATATC
AACTACAGCA ATATTTGTTC ATGCAAATGT CGCTTTTGTG CCTTCTTCCG GAACAAAGAG
GATGCAGACG CTTATGTGAT AAGCCCGGAA AGCCTTTTTG ACAAAATTGA TGAAGCCATG
GAGCTGGGAG CTACCCAGCT TATGATTCAG GGTGGGCTTA ACGAAGATCT GGATATAAAG
TATTTTGAAG AAATGTTTAG CAGTATCAAA GCCCGCTACG ATATTTGTAT TCATTCCTTG
ACCGCTCCAG AGATTGCCTT TATTGCCCGT ATTTCCGGGC TGAATATAAG GGAAACTCTG
ATGCGGCTGA AAGCGGCCGG CTTGGATTCG CTTCCCGGCG GGGGAGCCGA AGTTTTACAT
GATGATGTAC GCCGGGAGAT AAGTCCTAAT AAAATTAGCA GTAGCCAATG GCTGGAGGTA
ATGAAAATTG CCCATGAAAT AGGGATGGAA ACGACTGCAA CTATGATGAT GGGTAGTGTG
GATCAACTTA AGCACCGGGT GGCTCATCTG CGGCTGATAA GAGATTTGCA GGATGAAACC
GGAGGGTTTA GGGCCTTTAT TCCCTGGACC TACCAACCGG GTAATAACGA ACTGATGGGG
CGTAAAATGT ACTCGGCCCA GTACTTGAAA TTTCTGGCCC TGTCCCGGCT CTATTTGGAT
AACTTTGCTC ACATCCAGGG TTCCTGGGTT ACGCAAGGAG ATAGGGTTGG GCAGATTTCA
TTGCTTTTCG GTGCTGATGA TCTGGGCAGT ATTATGATAG AAGAAAATGT GGTTCGCTCG
GCAGGTTTGG AATATAAAAT GAAGAAAGAA GAAATGATCG AACTTATAAG GGGAGCAGGT
AGGATTCCTG CACTAAGAGA CACTGAATAC CGGATATTAG AGGTATATTA G
 
Protein sequence
MPITIRQRLK EIMNGRRMSD EDFLLLYEQG ELLEIGQAAN RKREEIFGNN QATFVIDRNI 
NYSNICSCKC RFCAFFRNKE DADAYVISPE SLFDKIDEAM ELGATQLMIQ GGLNEDLDIK
YFEEMFSSIK ARYDICIHSL TAPEIAFIAR ISGLNIRETL MRLKAAGLDS LPGGGAEVLH
DDVRREISPN KISSSQWLEV MKIAHEIGME TTATMMMGSV DQLKHRVAHL RLIRDLQDET
GGFRAFIPWT YQPGNNELMG RKMYSAQYLK FLALSRLYLD NFAHIQGSWV TQGDRVGQIS
LLFGADDLGS IMIEENVVRS AGLEYKMKKE EMIELIRGAG RIPALRDTEY RILEVY