Gene Swol_1145 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwol_1145 
Symbol 
ID4281452 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophomonas wolfei subsp. wolfei str. Goettingen 
KingdomBacteria 
Replicon accessionNC_008346 
Strand+ 
Start bp1325316 
End bp1326443 
Gene Length1128 bp 
Protein Length375 aa 
Translation table11 
GC content43% 
IMG OID638138018 
Producthypothetical protein 
Protein accessionYP_753826 
Protein GI114566672 
COG category[I] Lipid transport and metabolism 
COG ID[COG3243] Poly(3-hydroxyalkanoate) synthetase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.444597 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATTGGA TGGATCAACC GGATCTTTAC AGCCGATATA AAATTTTTCT TGAAATACTT 
CAGAGCAAAG AGCATATATC TTTATTTGAC CCCAGGTTAA AAAGATATAC GGATATACTG 
ATAGATCTGG AAAAGCCTTT TACTACCTGG TCTACTCCTA ACCATATTAT ATTAGTACAT 
AAGACCTTGT GCTTGCGGCA TTTCCCCAAC AAATATGAGA GTTCGGCTAA AAGGCCGGTA 
CTAATTTTAC CGCCTCAAGC TGGACACCAT TCCAACCTGG CCGATTATTC CCCGGCCCAA 
AGTTTGGTTC GGGTATTTCA CCGCTATGGC TATGATGTTT ATGTTACCCA GTGGTTATCC 
GCTACTACTG AGTATAAAGA TCTGGGAATA GAAGACTATA TAAGGTTGAC TGATGAGGCG 
GTGGAAGAAG TAAGAAAAAG AACCGGGGTT TATAAAATTC ACCTGGTGGG GCAATGTCAA 
GGCGGTTGGC AGGCTAGTAT TTATACATCT CTTTTTCCAG ATAAGATTTC CACGCTGGTA 
TCAGCGGCAG CTCCGATAGA TGTTAATGCC AAACCCTCCC CCATAGTGGA ATATGCCCAA 
AAGCTGTCCA TTGATGTCTT TCGCTTTATG GTTAATTCCG GCGGTGGGGT AATGCCGGGT 
AAATTTATTT TACAGGGTTT TAAGAGTATG CAGCCGGAAG AGCATTATGT GCGTAAGTAT 
TTTCGTCTCT GGCAGATGAT CAAAGAGGGC GATGAAGATG GAGTTAAGCG TTTTATACAC 
TTCGAAAATT GGTATCAGTA TACGCAAAAC CTTCCCGGGC GTTTTTATCT GGAGATTGTA 
AAAAACATAT TCAAGGAGAA TAATCTCACC AAGCCAGGCA GTTTTCAGCT TGATGGCCGT 
CCGGTTGATT TAAGAAATAT AAGCTGCCCG GTAATTATAA TGGCCGGGAA GAAAGACCAT 
ATTACTCCTC CTGAGCAGGC TTTTGCTCTT AAGAACTATA TCTCTACCCC GGCTGCGGAT 
GTAATCGAGA TACTAACCGA GGGAGGACAT ATCGGGACTT TGATGGGTAC CGAATCTCTG 
CGGGAAGACT GGACCGCGGT AAACGAAGTG CTTAAGCTGG CCATTTAG
 
Protein sequence
MNWMDQPDLY SRYKIFLEIL QSKEHISLFD PRLKRYTDIL IDLEKPFTTW STPNHIILVH 
KTLCLRHFPN KYESSAKRPV LILPPQAGHH SNLADYSPAQ SLVRVFHRYG YDVYVTQWLS 
ATTEYKDLGI EDYIRLTDEA VEEVRKRTGV YKIHLVGQCQ GGWQASIYTS LFPDKISTLV 
SAAAPIDVNA KPSPIVEYAQ KLSIDVFRFM VNSGGGVMPG KFILQGFKSM QPEEHYVRKY 
FRLWQMIKEG DEDGVKRFIH FENWYQYTQN LPGRFYLEIV KNIFKENNLT KPGSFQLDGR 
PVDLRNISCP VIIMAGKKDH ITPPEQAFAL KNYISTPAAD VIEILTEGGH IGTLMGTESL 
REDWTAVNEV LKLAI