Gene Swol_1080 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwol_1080 
Symbol 
ID4281569 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophomonas wolfei subsp. wolfei str. Goettingen 
KingdomBacteria 
Replicon accessionNC_008346 
Strand
Start bp1235366 
End bp1237837 
Gene Length2472 bp 
Protein Length823 aa 
Translation table11 
GC content49% 
IMG OID638137949 
ProductATP-dependent transcriptional regulator-like protein 
Protein accessionYP_753761 
Protein GI114566607 
COG category[K] Transcription 
COG ID[COG2909] ATP-dependent transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGAACAG GAAAAAGCAA TAGCAACGAA CTACATTATT ATTCCGACCG GCTCAAACGC 
AAATTGGAGC AGATACATCT TGTGCCGGTT ACTATTGTCG AAGCCCCGTC CGGTTACGGT
AAAACCACCG CAATACGAGA CTTTCTACAA AACTCCCTCT CCCAGGGCAC GCCCATCTAT
TGGTTCACTG CTATGGATGA AAAGCCCTCC GCGGCTTTTC GGCGACTCTG CCGCGAGATT
GAGAAGATTG ACAGATATGC GGGTGAGCGA CTCGTTAAAA TTGGACTACC CAACGCCGGC
ACCATTGGCG AAGCAAGTGA AGCCCTGCGC TTAGTCCAGT GCAAACATGA AACCTATCTG
GTGATTGATA ACTTTCATTT TTTGCAGGAC GCCCTGCCCC CAGCCTTTTT TCTTGCGCTC
CTCGAACATG GTGGCCAGGG CCTGCATGTC ATTATCGTGA CCCAAATGCT CAAACGAGAT
ACCCTTTCTA TTGTTGCAGG TCATGGGCTT TTGCATATTA CGGTTAGTGA TATGCGGTTG
AACACAAGAG ATATCTGCCG TTATTACGCC CTCGCTAATG TAAAAATTAC CCTGGAGGAC
GCACAAGAGG TCGAGCGCTA CACCGAAGGC TGGATTATCG CAGTATATTT ACAGCTCTCT
ACTTTTCTGG AAACAGGTAC ATTCTCCGAT ACACCCGGTA TTTTGGCTCT TATGGAGCAT
TTAGTATGGG ATAAGTTGAC CGAAGAACAG CAAAACTTTC TATTGTATTT ATCACCGTTT
GAGATGGTCA GCGTACAGCA GTCATGTTCC CTCATCGGCT GTGATACACT GCCGGAATAC
GCTTTGGAGG CCTTCGCGAG TCCCTTTATC CACTACGATC CAACCGAGCG GCAATACGAA
GTGCATAGCA TTCTGACCGA GCTGTTTATT CAAAAGCGCG GGGAGCGTGG GCCTGCGTTT
GAACGGCAAT GCCTGTTGCA GGCGGGGGAT TTTTGCCGGG ATGAAGGGCA AACCGCTAGG
GCTCTGGGCT TTTACATGCA AATCCGTGAT TATGAGCGGA TGCTCTCGCT TGACCTTTCC
GAAATGAATT TGGAGATTAT TAACGCTGTA CCCTTTACCG AGTTAGCTCT TGATATTGCC
CAAAATTGCC CAGCAGAAAT CAAAAAGAAA TATATCCTTA ATATGCTCCG CATTGCCTGG
ATCTTATTTA TGGCCGGGAT GAATGAGCAG TTTGAGATAT TGATGGATGA GCTGCATACT
ATGCCAGAAC TGCTGGACAA TTCTGATTTA TTGAGGGAAT GGCTGCTGTT GTCCTCATAT
AGGAATTTCC CTAATCTGGC TGAGATGACT GTCATAGTCA GACAGGCTGC CCCACTTTTT
AAAAGCCAAT ACTCCCAGGT AATTCTTCCT ACTACGCTCT GGTGTTTTGG CAATTATTCC
CCATTAACTG AGTTCTACAC TAAACCTGGT GAGGCTGATC GCCAGGCCGA TGTGCTGGAG
GAGTACATCA CCATCTATTC GCGTCTTACC AATGGTCATG GCAGCGGTGC AGATGCGCTA
TTTCGCGCGG AACTGGCCTA TCAACGGGGA AACTTGAACG ACGCGGAGAT ACTTGCCTAC
AAGGCGGCGT TTCTTGCCGA AAGCAAGCAG CAAAGTGTGG TTCTATTAGG CGCCGCCATA
TTGCTGGCCC ATGTTGCGTT GCACAAAGCA GATACAGTCG GCTGGGAGCG TGCTATCGCC
TCAATGGAAC ATGCCGCCTC CTTCGACCGG CAGGATACTT TCGTCATTAG GTCTGTTATA
GATATTATTC GAGGCGTTCT TCTAAACGAG TTTCAGAATC ATATGAGTAT CGCTGATTGG
CTGCAAAATG CCGATTTTGA GGATCGTCGC CTGTCCCCTG CTGTAATCAA CATTGCGCTG
TTCGTACACC TGGTCTTTCT CCTGCATCAA GGTGAATTTG CCCGAGTTAT AGGCACGGCA
CAGGCTGTAC GACCGGCAGA GGGGCTATTG AGCCCCTATG GGGATATCTT TGCTTGTTTC
CTTATGGCCA CCAGCCATAT GGCGTTGGGC AACCGTGTCC AAGCCGCTGC TTTTGTTGAA
GATGCTGCCC GAAAAGCTCT TCCTGATGGG TTGGTGTCTC CCTTTGCCTC GTATTCACAA
CTGCTGGGTG ATCTGGTTGA TGAGGTTATT GCGCGTGATT ATCCCGCCCT TTTGGAGAAG
TTTAAGACCG TCAGGAAGCG CTTCTCGCAA GGCTGGTTCA CGTTACGTGA AGCCCTTTTT
TCAGGCGAGC TACCTCCTGA CTTAACAGAA AGGGAATATG AAGTAGCTAA ATTAGCAGCT
ACGGGGCTGC GTAACAGCGA AATCGCGGAA AAGTTGGTGA TAACGGAAAG CACAGTGCGC
TCACACATGC GAACAATATT TCAAAAGCTT CAAATCGACC GCCGCACCCG CCTGGCGGAA
AAACTGAAGT AA
 
Protein sequence
MGTGKSNSNE LHYYSDRLKR KLEQIHLVPV TIVEAPSGYG KTTAIRDFLQ NSLSQGTPIY 
WFTAMDEKPS AAFRRLCREI EKIDRYAGER LVKIGLPNAG TIGEASEALR LVQCKHETYL
VIDNFHFLQD ALPPAFFLAL LEHGGQGLHV IIVTQMLKRD TLSIVAGHGL LHITVSDMRL
NTRDICRYYA LANVKITLED AQEVERYTEG WIIAVYLQLS TFLETGTFSD TPGILALMEH
LVWDKLTEEQ QNFLLYLSPF EMVSVQQSCS LIGCDTLPEY ALEAFASPFI HYDPTERQYE
VHSILTELFI QKRGERGPAF ERQCLLQAGD FCRDEGQTAR ALGFYMQIRD YERMLSLDLS
EMNLEIINAV PFTELALDIA QNCPAEIKKK YILNMLRIAW ILFMAGMNEQ FEILMDELHT
MPELLDNSDL LREWLLLSSY RNFPNLAEMT VIVRQAAPLF KSQYSQVILP TTLWCFGNYS
PLTEFYTKPG EADRQADVLE EYITIYSRLT NGHGSGADAL FRAELAYQRG NLNDAEILAY
KAAFLAESKQ QSVVLLGAAI LLAHVALHKA DTVGWERAIA SMEHAASFDR QDTFVIRSVI
DIIRGVLLNE FQNHMSIADW LQNADFEDRR LSPAVINIAL FVHLVFLLHQ GEFARVIGTA
QAVRPAEGLL SPYGDIFACF LMATSHMALG NRVQAAAFVE DAARKALPDG LVSPFASYSQ
LLGDLVDEVI ARDYPALLEK FKTVRKRFSQ GWFTLREALF SGELPPDLTE REYEVAKLAA
TGLRNSEIAE KLVITESTVR SHMRTIFQKL QIDRRTRLAE KLK