Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swol_1080 |
Symbol | |
ID | 4281569 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
Kingdom | Bacteria |
Replicon accession | NC_008346 |
Strand | - |
Start bp | 1235366 |
End bp | 1237837 |
Gene Length | 2472 bp |
Protein Length | 823 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 638137949 |
Product | ATP-dependent transcriptional regulator-like protein |
Protein accession | YP_753761 |
Protein GI | 114566607 |
COG category | [K] Transcription |
COG ID | [COG2909] ATP-dependent transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGAACAG GAAAAAGCAA TAGCAACGAA CTACATTATT ATTCCGACCG GCTCAAACGC AAATTGGAGC AGATACATCT TGTGCCGGTT ACTATTGTCG AAGCCCCGTC CGGTTACGGT AAAACCACCG CAATACGAGA CTTTCTACAA AACTCCCTCT CCCAGGGCAC GCCCATCTAT TGGTTCACTG CTATGGATGA AAAGCCCTCC GCGGCTTTTC GGCGACTCTG CCGCGAGATT GAGAAGATTG ACAGATATGC GGGTGAGCGA CTCGTTAAAA TTGGACTACC CAACGCCGGC ACCATTGGCG AAGCAAGTGA AGCCCTGCGC TTAGTCCAGT GCAAACATGA AACCTATCTG GTGATTGATA ACTTTCATTT TTTGCAGGAC GCCCTGCCCC CAGCCTTTTT TCTTGCGCTC CTCGAACATG GTGGCCAGGG CCTGCATGTC ATTATCGTGA CCCAAATGCT CAAACGAGAT ACCCTTTCTA TTGTTGCAGG TCATGGGCTT TTGCATATTA CGGTTAGTGA TATGCGGTTG AACACAAGAG ATATCTGCCG TTATTACGCC CTCGCTAATG TAAAAATTAC CCTGGAGGAC GCACAAGAGG TCGAGCGCTA CACCGAAGGC TGGATTATCG CAGTATATTT ACAGCTCTCT ACTTTTCTGG AAACAGGTAC ATTCTCCGAT ACACCCGGTA TTTTGGCTCT TATGGAGCAT TTAGTATGGG ATAAGTTGAC CGAAGAACAG CAAAACTTTC TATTGTATTT ATCACCGTTT GAGATGGTCA GCGTACAGCA GTCATGTTCC CTCATCGGCT GTGATACACT GCCGGAATAC GCTTTGGAGG CCTTCGCGAG TCCCTTTATC CACTACGATC CAACCGAGCG GCAATACGAA GTGCATAGCA TTCTGACCGA GCTGTTTATT CAAAAGCGCG GGGAGCGTGG GCCTGCGTTT GAACGGCAAT GCCTGTTGCA GGCGGGGGAT TTTTGCCGGG ATGAAGGGCA AACCGCTAGG GCTCTGGGCT TTTACATGCA AATCCGTGAT TATGAGCGGA TGCTCTCGCT TGACCTTTCC GAAATGAATT TGGAGATTAT TAACGCTGTA CCCTTTACCG AGTTAGCTCT TGATATTGCC CAAAATTGCC CAGCAGAAAT CAAAAAGAAA TATATCCTTA ATATGCTCCG CATTGCCTGG ATCTTATTTA TGGCCGGGAT GAATGAGCAG TTTGAGATAT TGATGGATGA GCTGCATACT ATGCCAGAAC TGCTGGACAA TTCTGATTTA TTGAGGGAAT GGCTGCTGTT GTCCTCATAT AGGAATTTCC CTAATCTGGC TGAGATGACT GTCATAGTCA GACAGGCTGC CCCACTTTTT AAAAGCCAAT ACTCCCAGGT AATTCTTCCT ACTACGCTCT GGTGTTTTGG CAATTATTCC CCATTAACTG AGTTCTACAC TAAACCTGGT GAGGCTGATC GCCAGGCCGA TGTGCTGGAG GAGTACATCA CCATCTATTC GCGTCTTACC AATGGTCATG GCAGCGGTGC AGATGCGCTA TTTCGCGCGG AACTGGCCTA TCAACGGGGA AACTTGAACG ACGCGGAGAT ACTTGCCTAC AAGGCGGCGT TTCTTGCCGA AAGCAAGCAG CAAAGTGTGG TTCTATTAGG CGCCGCCATA TTGCTGGCCC ATGTTGCGTT GCACAAAGCA GATACAGTCG GCTGGGAGCG TGCTATCGCC TCAATGGAAC ATGCCGCCTC CTTCGACCGG CAGGATACTT TCGTCATTAG GTCTGTTATA GATATTATTC GAGGCGTTCT TCTAAACGAG TTTCAGAATC ATATGAGTAT CGCTGATTGG CTGCAAAATG CCGATTTTGA GGATCGTCGC CTGTCCCCTG CTGTAATCAA CATTGCGCTG TTCGTACACC TGGTCTTTCT CCTGCATCAA GGTGAATTTG CCCGAGTTAT AGGCACGGCA CAGGCTGTAC GACCGGCAGA GGGGCTATTG AGCCCCTATG GGGATATCTT TGCTTGTTTC CTTATGGCCA CCAGCCATAT GGCGTTGGGC AACCGTGTCC AAGCCGCTGC TTTTGTTGAA GATGCTGCCC GAAAAGCTCT TCCTGATGGG TTGGTGTCTC CCTTTGCCTC GTATTCACAA CTGCTGGGTG ATCTGGTTGA TGAGGTTATT GCGCGTGATT ATCCCGCCCT TTTGGAGAAG TTTAAGACCG TCAGGAAGCG CTTCTCGCAA GGCTGGTTCA CGTTACGTGA AGCCCTTTTT TCAGGCGAGC TACCTCCTGA CTTAACAGAA AGGGAATATG AAGTAGCTAA ATTAGCAGCT ACGGGGCTGC GTAACAGCGA AATCGCGGAA AAGTTGGTGA TAACGGAAAG CACAGTGCGC TCACACATGC GAACAATATT TCAAAAGCTT CAAATCGACC GCCGCACCCG CCTGGCGGAA AAACTGAAGT AA
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Protein sequence | MGTGKSNSNE LHYYSDRLKR KLEQIHLVPV TIVEAPSGYG KTTAIRDFLQ NSLSQGTPIY WFTAMDEKPS AAFRRLCREI EKIDRYAGER LVKIGLPNAG TIGEASEALR LVQCKHETYL VIDNFHFLQD ALPPAFFLAL LEHGGQGLHV IIVTQMLKRD TLSIVAGHGL LHITVSDMRL NTRDICRYYA LANVKITLED AQEVERYTEG WIIAVYLQLS TFLETGTFSD TPGILALMEH LVWDKLTEEQ QNFLLYLSPF EMVSVQQSCS LIGCDTLPEY ALEAFASPFI HYDPTERQYE VHSILTELFI QKRGERGPAF ERQCLLQAGD FCRDEGQTAR ALGFYMQIRD YERMLSLDLS EMNLEIINAV PFTELALDIA QNCPAEIKKK YILNMLRIAW ILFMAGMNEQ FEILMDELHT MPELLDNSDL LREWLLLSSY RNFPNLAEMT VIVRQAAPLF KSQYSQVILP TTLWCFGNYS PLTEFYTKPG EADRQADVLE EYITIYSRLT NGHGSGADAL FRAELAYQRG NLNDAEILAY KAAFLAESKQ QSVVLLGAAI LLAHVALHKA DTVGWERAIA SMEHAASFDR QDTFVIRSVI DIIRGVLLNE FQNHMSIADW LQNADFEDRR LSPAVINIAL FVHLVFLLHQ GEFARVIGTA QAVRPAEGLL SPYGDIFACF LMATSHMALG NRVQAAAFVE DAARKALPDG LVSPFASYSQ LLGDLVDEVI ARDYPALLEK FKTVRKRFSQ GWFTLREALF SGELPPDLTE REYEVAKLAA TGLRNSEIAE KLVITESTVR SHMRTIFQKL QIDRRTRLAE KLK
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