More than 300 homologs were found in PanDaTox collection
for query gene Swol_1080 on replicon NC_008346
Organism: Syntrophomonas wolfei subsp. wolfei str. Goettingen



Page 1 of 3    << first  < prev  1  2  3    next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008346  Swol_1080  ATP-dependent transcriptional regulator-like protein  100 
 
 
823 aa  1701    Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  n/a   
 
 
-
 
NC_011769  DvMF_1879  ATP-dependent transcriptional regulator, MalT-like, LuxR family  31.35 
 
 
839 aa  356  1e-96  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_013216  Dtox_0621  ATP-dependent transcriptional regulator, MalT- like, LuxR family  23.88 
 
 
824 aa  194  7e-48  Desulfotomaculum acetoxidans DSM 771  Bacteria  unclonable  0.000000506024  unclonable  0.000000000328283 
 
 
-
 
NC_008346  Swol_2065  ATP-dependent transcriptional regulator-like protein  24.4 
 
 
838 aa  190  9e-47  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  n/a   
 
 
-
 
NC_009511  Swit_4199  regulatory protein, LuxR  26.64 
 
 
855 aa  69.3  0.0000000003  Sphingomonas wittichii RW1  Bacteria  normal  normal  0.142655 
 
 
-
 
NC_013757  Gobs_1678  ATP-dependent transcriptional regulator, MalT- like, LuxR family  23.12 
 
 
910 aa  68.2  0.0000000007  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_007333  Tfu_2491  LuxR response regulator receiver  52.73 
 
 
242 aa  63.9  0.00000001  Thermobifida fusca YX  Bacteria  normal  0.470277  n/a   
 
 
-
 
NC_010506  Swoo_4031  ATP-dependent transcription regulator LuxR  22.1 
 
 
896 aa  63.2  0.00000002  Shewanella woodyi ATCC 51908  Bacteria  normal  0.924331  normal  0.36139 
 
 
-
 
NC_009523  RoseRS_4258  two component LuxR family transcriptional regulator  51.43 
 
 
216 aa  60.8  0.00000009  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_012560  Avin_39970  transcriptional regulatory protein AcoK, LuxR family  26.11 
 
 
900 aa  60.5  0.0000001  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_011891  A2cp1_3596  transcriptional regulator, LuxR family  54.55 
 
 
178 aa  60.5  0.0000001  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  0.445896  n/a   
 
 
-
 
NC_007760  Adeh_3447  LuxR family transcriptional regulator  54.24 
 
 
175 aa  60.5  0.0000001  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_014210  Ndas_4080  two component transcriptional regulator, LuxR family  55.56 
 
 
241 aa  60.8  0.0000001  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.858367 
 
 
-
 
NC_011145  AnaeK_3528  transcriptional regulator, LuxR family  54.55 
 
 
178 aa  60.5  0.0000001  Anaeromyxobacter sp. K  Bacteria  normal  0.993919  n/a   
 
 
-
 
NC_009675  Anae109_3555  response regulator receiver protein  54.55 
 
 
176 aa  60.1  0.0000002  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal  0.0548987 
 
 
-
 
NC_013159  Svir_39510  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  48.28 
 
 
216 aa  59.7  0.0000002  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal  0.657091 
 
 
-
 
NC_007498  Pcar_0140  ATP-dependent transcriptional regulator  24.35 
 
 
977 aa  59.3  0.0000003  Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
NC_014165  Tbis_0775  LuxR family two component transcriptional regulator  48.44 
 
 
234 aa  58.9  0.0000003  Thermobispora bispora DSM 43833  Bacteria  normal  normal  0.336237 
 
 
-
 
NC_010002  Daci_4815  ATP-dependent transcription regulator LuxR  26.88 
 
 
924 aa  58.9  0.0000004  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_007204  Psyc_1446  LuxR family transcriptional regulator  21.13 
 
 
921 aa  58.9  0.0000004  Psychrobacter arcticus 273-4  Bacteria  normal  0.308791  normal 
 
 
-
 
NC_013510  Tcur_4038  two component transcriptional regulator, LuxR family  56 
 
 
253 aa  58.9  0.0000004  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_4133  ATP-dependent transcriptional regulator, MalT-like, LuxR family  19.41 
 
 
749 aa  58.9  0.0000004  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_008578  Acel_1760  two component LuxR family transcriptional regulator  54 
 
 
303 aa  58.9  0.0000004  Acidothermus cellulolyticus 11B  Bacteria  normal  normal  0.887336 
 
 
-
 
NC_013131  Caci_7589  two component transcriptional regulator, LuxR family  56 
 
 
225 aa  58.9  0.0000004  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.438424  normal  0.37363 
 
 
-
 
NC_013595  Sros_1417  response regulator receiver protein  46.88 
 
 
234 aa  58.5  0.0000005  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.0224272 
 
 
-
 
NC_007595  Synpcc7942_B2644  response regulator receiver domain-containing protein  33.05 
 
 
235 aa  58.2  0.0000006  Synechococcus elongatus PCC 7942  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_0565  two component transcriptional regulator, LuxR family  48.28 
 
 
213 aa  57.8  0.0000007  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_012034  Athe_2627  two component transcriptional regulator, LuxR family  49.12 
 
 
211 aa  58.2  0.0000007  Anaerocellum thermophilum DSM 6725  Bacteria  normal  n/a   
 
 
-
 
NC_008527  LACR_0967  DNA-binding response regulator  50.91 
 
 
209 aa  57.8  0.0000008  Lactococcus lactis subsp. cremoris SK11  Bacteria  normal  0.598364  n/a   
 
 
-
 
NC_009921  Franean1_5840  two component LuxR family transcriptional regulator  51.85 
 
 
237 aa  57.8  0.0000009  Frankia sp. EAN1pec  Bacteria  normal  0.0206065  normal  0.380036 
 
 
-
 
NC_007614  Nmul_A2674  two component LuxR family transcriptional regulator  48.28 
 
 
203 aa  57.4  0.0000009  Nitrosospira multiformis ATCC 25196  Bacteria  normal  0.125422  n/a   
 
 
-
 
NC_014210  Ndas_4366  two component transcriptional regulator, LuxR family  51.85 
 
 
225 aa  57.8  0.0000009  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_013170  Ccur_10690  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  37.61 
 
 
215 aa  57.8  0.0000009  Cryptobacterium curtum DSM 15641  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_2786  transcriptional regulator, LuxR family  39.56 
 
 
511 aa  57.4  0.000001  Eggerthella lenta DSM 2243  Bacteria  normal  normal  0.0490323 
 
 
-
 
NC_009767  Rcas_3763  two component LuxR family transcriptional regulator  50.94 
 
 
221 aa  57  0.000001  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal  0.0403461 
 
 
-
 
NC_007777  Francci3_0765  two component LuxR family transcriptional regulator  50 
 
 
237 aa  57  0.000001  Frankia sp. CcI3  Bacteria  normal  0.272345  normal 
 
 
-
 
NC_007973  Rmet_2524  ATP-dependent transcription regulator LuxR  22.33 
 
 
914 aa  57.4  0.000001  Cupriavidus metallidurans CH34  Bacteria  normal  0.9975  normal  0.793034 
 
 
-
 
NC_009656  PSPA7_3548  transcriptional regulator  26.82 
 
 
924 aa  57  0.000001  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_009012  Cthe_1267  two component LuxR family transcriptional regulator  52.83 
 
 
216 aa  57.4  0.000001  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_009523  RoseRS_3278  two component LuxR family transcriptional regulator  50.94 
 
 
214 aa  57.4  0.000001  Roseiflexus sp. RS-1  Bacteria  normal  normal  0.749326 
 
 
-
 
NC_007298  Daro_3200  LuxR family transcriptional regulator  47.62 
 
 
205 aa  56.2  0.000002  Dechloromonas aromatica RCB  Bacteria  normal  0.618751  normal  0.891545 
 
 
-
 
NC_007333  Tfu_0758  regulatory protein, LuxR  49.09 
 
 
827 aa  56.2  0.000002  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_014210  Ndas_3609  transcriptional regulator, LuxR family  54.24 
 
 
818 aa  56.6  0.000002  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_010320  Teth514_2042  two component LuxR family transcriptional regulator  48.21 
 
 
208 aa  56.6  0.000002  Thermoanaerobacter sp. X514  Bacteria  normal  n/a   
 
 
-
 
NC_011831  Cagg_0590  transcriptional activator domain protein  26.34 
 
 
1163 aa  56.2  0.000002  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal  0.422877 
 
 
-
 
NC_008463  PA14_41810  putative transcriptional regulator  26.82 
 
 
901 aa  56.2  0.000002  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_2042  ATP-dependent transcriptional regulator, MalT- like, LuxR family  52.94 
 
 
947 aa  56.6  0.000002  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_008699  Noca_1438  response regulator receiver  54.17 
 
 
213 aa  56.6  0.000002  Nocardioides sp. JS614  Bacteria  normal  0.494689  n/a   
 
 
-
 
NC_011071  Smal_1099  two component transcriptional regulator, LuxR family  37.84 
 
 
213 aa  56.2  0.000002  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal 
 
 
-
 
NC_010717  PXO_04459  two-component system regulatory protein  37.84 
 
 
213 aa  56.6  0.000002  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  n/a   
 
 
-
 
NC_009767  Rcas_1936  ATP-dependent transcription regulator LuxR  31.69 
 
 
880 aa  56.2  0.000002  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.443116  hitchhiker  0.000000309593 
 
 
-
 
NC_009921  Franean1_5512  two component LuxR family transcriptional regulator  56 
 
 
250 aa  55.8  0.000003  Frankia sp. EAN1pec  Bacteria  normal  normal  0.631776 
 
 
-
 
NC_013172  Bfae_02400  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  43.64 
 
 
255 aa  55.8  0.000003  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_011988  Avi_5812  transcriptional regulator LuxR family  23.47 
 
 
894 aa  56.2  0.000003  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_011899  Hore_20540  regulatory protein LuxR  29.41 
 
 
887 aa  55.8  0.000003  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_007644  Moth_0023  two component LuxR family transcriptional regulator  54.72 
 
 
221 aa  55.8  0.000003  Moorella thermoacetica ATCC 39073  Bacteria  normal  0.273145  hitchhiker  0.00000136124 
 
 
-
 
NC_007777  Francci3_1039  two component LuxR family transcriptional regulator  56 
 
 
238 aa  55.8  0.000003  Frankia sp. CcI3  Bacteria  normal  normal  0.135118 
 
 
-
 
NC_011898  Ccel_1863  two component transcriptional regulator, LuxR family  50.94 
 
 
216 aa  56.2  0.000003  Clostridium cellulolyticum H10  Bacteria  hitchhiker  0.00000548978  n/a   
 
 
-
 
NC_007973  Rmet_2534  ATP-dependent transcription regulator LuxR  22.19 
 
 
925 aa  55.8  0.000003  Cupriavidus metallidurans CH34  Bacteria  normal  0.41261  normal  0.169149 
 
 
-
 
NC_010184  BcerKBAB4_5205  two component LuxR family transcriptional regulator  38.95 
 
 
215 aa  55.8  0.000003  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_3178  transcriptional regulator, LuxR family  50.91 
 
 
1074 aa  55.8  0.000003  Actinosynnema mirum DSM 43827  Bacteria  decreased coverage  0.00421599  n/a   
 
 
-
 
NC_010718  Nther_0747  two component transcriptional regulator, LuxR family  32.74 
 
 
232 aa  55.8  0.000003  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  0.643618  normal  0.38139 
 
 
-
 
NC_009523  RoseRS_2963  regulatory protein, LuxR  31.84 
 
 
824 aa  56.2  0.000003  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_013530  Xcel_2041  transcriptional regulator, LuxR family  51.79 
 
 
927 aa  55.5  0.000004  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.111867  n/a   
 
 
-
 
NC_007510  Bcep18194_A4838  ATP-dependent transcription regulator LuxR  31.54 
 
 
900 aa  55.5  0.000004  Burkholderia sp. 383  Bacteria  normal  0.874018  hitchhiker  0.003849 
 
 
-
 
NC_009921  Franean1_3551  cyclic nucleotide-binding protein  48.28 
 
 
1001 aa  55.5  0.000004  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_009767  Rcas_4222  ATP-dependent transcription regulator LuxR  50 
 
 
309 aa  55.5  0.000004  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal  0.157864 
 
 
-
 
NC_013385  Adeg_1034  two component transcriptional regulator, LuxR family  48.08 
 
 
213 aa  55.5  0.000004  Ammonifex degensii KC4  Bacteria  normal  n/a   
 
 
-
 
NC_013165  Shel_11580  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  50 
 
 
515 aa  55.5  0.000004  Slackia heliotrinireducens DSM 20476  Bacteria  normal  0.937657  normal 
 
 
-
 
NC_007948  Bpro_2432  two component LuxR family transcriptional regulator  43.1 
 
 
246 aa  55.5  0.000005  Polaromonas sp. JS666  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_0356  two component transcriptional regulator, LuxR family  41.79 
 
 
220 aa  55.1  0.000005  Conexibacter woesei DSM 14684  Bacteria  normal  0.165726  normal  0.0985551 
 
 
-
 
NC_009972  Haur_1506  ATP-dependent transcription regulator LuxR  31.34 
 
 
876 aa  55.1  0.000006  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_007413  Ava_4518  two component LuxR family transcriptional regulator  49.06 
 
 
236 aa  54.7  0.000006  Anabaena variabilis ATCC 29413  Bacteria  normal  normal 
 
 
-
 
NC_009523  RoseRS_3421  two component LuxR family transcriptional regulator  50.91 
 
 
223 aa  54.7  0.000006  Roseiflexus sp. RS-1  Bacteria  normal  normal  0.0556432 
 
 
-
 
NC_013441  Gbro_1936  regulatory protein LuxR  50 
 
 
218 aa  54.7  0.000006  Gordonia bronchialis DSM 43247  Bacteria  normal  0.548655  n/a   
 
 
-
 
NC_008146  Mmcs_0427  LuxR family transcriptional regulator  53.85 
 
 
544 aa  54.7  0.000007  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_0437  LuxR family transcriptional regulator  53.85 
 
 
544 aa  54.7  0.000007  Mycobacterium sp. KMS  Bacteria  normal  0.139362  normal  0.0303285 
 
 
-
 
NC_009077  Mjls_0414  LuxR family transcriptional regulator  53.85 
 
 
544 aa  54.7  0.000007  Mycobacterium sp. JLS  Bacteria  normal  normal  0.865726 
 
 
-
 
NC_013595  Sros_3331  response regulator receiver protein  46.15 
 
 
227 aa  54.7  0.000007  Streptosporangium roseum DSM 43021  Bacteria  normal  0.832029  normal  0.250763 
 
 
-
 
NC_013530  Xcel_3197  transcriptional regulator, LuxR family  42.11 
 
 
876 aa  54.3  0.000008  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_3625  transcriptional regulator, LuxR family  52.83 
 
 
925 aa  54.7  0.000008  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_003909  BCE_5540  DNA-binding response regulator  51.92 
 
 
215 aa  53.5  0.00001  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_011831  Cagg_2575  ATP-dependent transcriptional regulator, MalT-like, LuxR family  51.85 
 
 
917 aa  53.9  0.00001  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal 
 
 
-
 
NC_005945  BAS5263  DNA-binding response regulator  51.92 
 
 
215 aa  53.5  0.00001  Bacillus anthracis str. Sterne  Bacteria  normal  0.24037  n/a   
 
 
-
 
NC_005957  BT9727_5091  response regulator  51.92 
 
 
215 aa  53.5  0.00001  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK5108  response regulator  51.92 
 
 
215 aa  53.5  0.00001  Bacillus cereus E33L  Bacteria  decreased coverage  0.00235048  n/a   
 
 
-
 
NC_007530  GBAA_5661  DNA-binding response regulator  51.92 
 
 
215 aa  53.5  0.00001  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_013159  Svir_33010  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  51.92 
 
 
223 aa  53.9  0.00001  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.163463  normal 
 
 
-
 
NC_009767  Rcas_3125  transcriptional activator domain-containing protein  21.18 
 
 
1068 aa  53.9  0.00001  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal 
 
 
-
 
NC_008697  Noca_4902  response regulator receiver  50 
 
 
216 aa  53.9  0.00001  Nocardioides sp. JS614  Bacteria  normal  0.443208  normal  0.676579 
 
 
-
 
NC_011658  BCAH187_A5591  DNA-binding response regulator  51.92 
 
 
215 aa  53.5  0.00001  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_013457  VEA_000509  nitrate/nitrite response regulator protein  46.94 
 
 
210 aa  54.3  0.00001  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_009921  Franean1_0072  LuxR family transcriptional regulator  45.45 
 
 
1000 aa  53.9  0.00001  Frankia sp. EAN1pec  Bacteria  normal  0.996458  normal 
 
 
-
 
NC_011772  BCG9842_B5417  DNA-binding response regulator  51.92 
 
 
215 aa  53.5  0.00001  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_011773  BCAH820_5506  DNA-binding response regulator  51.92 
 
 
215 aa  53.5  0.00001  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_009253  Dred_2108  two component LuxR family transcriptional regulator  37.65 
 
 
218 aa  54.3  0.00001  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_3297  transcriptional regulator, LuxR family  50 
 
 
908 aa  53.9  0.00001  Actinosynnema mirum DSM 43827  Bacteria  normal  0.19391  n/a   
 
 
-
 
NC_009456  VC0395_0120  transcriptional regulator MalT  22.49 
 
 
921 aa  53.5  0.00001  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_007511  Bcep18194_B1393  ATP-dependent transcription regulator LuxR  23.08 
 
 
913 aa  53.5  0.00002  Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
NC_008347  Mmar10_2699  two component LuxR family transcriptional regulator  44.26 
 
 
216 aa  53.5  0.00002  Maricaulis maris MCS10  Bacteria  normal  normal  0.144323 
 
 
-
 
Page 1 of 3    << first  < prev  1  2  3    next >  last >>