Gene Swol_1069 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwol_1069 
Symbol 
ID4281558 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophomonas wolfei subsp. wolfei str. Goettingen 
KingdomBacteria 
Replicon accessionNC_008346 
Strand
Start bp1218136 
End bp1218879 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content42% 
IMG OID638137938 
Productpolysaccharide deacetylase 
Protein accessionYP_753750 
Protein GI114566596 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0726] Predicted xylanase/chitin deacetylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.364826 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTTTTG TATTACAAAG GCGAAGCGTG GGGTTTTTTT TAGGAGGAAT CTTGTTTTTG 
GGTATCTCAC TTGGAGCCTA TAACCTGGCC TTGCACCCCA ATATGCATAA TTGGAAAGCC
CAGAAACTGG TGATAACTGA TGTAAAAACT ACGGAAAAAG CAGTGGCCCT GACCTTCGAT
GACGGTCCCG ATCCGGTAAA TACCCCGGTA GTTCTTGACA TGTTAAAGAA GCATCAAGCC
CAGGCTACCT TTTTCGTTGT GGGAATAAGG GCGGAAAAAC AGTCTGATCT TTTGCAAAGA
ATGGCCAATG AAGGGCATGA AATCGGCAAC CATAGTTATA GTCATGCTGA TTTCAATCAC
AAGAAAAAGG AGTTTTACCA GGAAGAAATA CGAAAAACCA ATGCATTAAT TGAACGCATC
AGCGGCCAGA AGTCCAAGCT TTTTCGTCCA CCAGGCGGTT ATCTTTCCTA TGATATGGTT
GAGGTCACCC AGAAAGAAAA AGTCACCATA GCCTATTGGA CCTATCAGCA GGATAGTAAA
GATTGGCAAG GAAACAATTC CTCTCAAATT GCGGCCCACA TAATAAAAAA CATAAAACCT
GGTCAGATAA TAATACTTCA TGATGGCTAT AAAAACGGCC TGGAAACAGC CCGCGCAGTG
GATAAACTGA TTCCTGAGCT TAAGCAGCAA GGCTACCGTT TTCTAACTAT GAGTGATTTA
ATGCTCCTGG AAAAGCAGGA ATAA
 
Protein sequence
MFFVLQRRSV GFFLGGILFL GISLGAYNLA LHPNMHNWKA QKLVITDVKT TEKAVALTFD 
DGPDPVNTPV VLDMLKKHQA QATFFVVGIR AEKQSDLLQR MANEGHEIGN HSYSHADFNH
KKKEFYQEEI RKTNALIERI SGQKSKLFRP PGGYLSYDMV EVTQKEKVTI AYWTYQQDSK
DWQGNNSSQI AAHIIKNIKP GQIIILHDGY KNGLETARAV DKLIPELKQQ GYRFLTMSDL
MLLEKQE