Gene Swol_1000 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwol_1000 
Symbol 
ID4283706 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophomonas wolfei subsp. wolfei str. Goettingen 
KingdomBacteria 
Replicon accessionNC_008346 
Strand
Start bp1137166 
End bp1137534 
Gene Length369 bp 
Protein Length122 aa 
Translation table11 
GC content48% 
IMG OID638137873 
Producthypothetical protein 
Protein accessionYP_753685 
Protein GI114566531 
COG category[F] Nucleotide transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only 
COG ID[COG0537] Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGCAGA AATGTATTTT TTGCCATGAG GAAGAAGCTT TATTGCAAAA TGAATTGGCC 
TGGGCTCGTT ATGATAAATA CCCAGTATCG CCGGGGCATC TGCTGATTAT CGCCAGGCGG
CATGTGCAAT GTTATTTTGA TAGCACCCCG AAGGAGCGAC TGGCGCTTAA TCAATTATTG
GAAGAAGCTA AAAAGCTTCT GGATAAGGAA TACCGACCGG ATGGTTACAA CATCGGGGTA
AACTGCGGTG ACGCGGCGGG ACAAACGATA ATGCACCTGC ATATTCACCT GATACCGCGC
TACCAGGGGG ATATTGATAA TCCCCGGGGT GGGGTACGGG GAGTAATACC GGATAAACGG
ATGTATTAG
 
Protein sequence
MEQKCIFCHE EEALLQNELA WARYDKYPVS PGHLLIIARR HVQCYFDSTP KERLALNQLL 
EEAKKLLDKE YRPDGYNIGV NCGDAAGQTI MHLHIHLIPR YQGDIDNPRG GVRGVIPDKR
MY