Gene Swol_0941 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwol_0941 
Symbol 
ID4282241 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophomonas wolfei subsp. wolfei str. Goettingen 
KingdomBacteria 
Replicon accessionNC_008346 
Strand+ 
Start bp1069720 
End bp1070376 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content48% 
IMG OID638137815 
ProductATP binding protein of ABC transporter 
Protein accessionYP_753627 
Protein GI114566473 
COG category[V] Defense mechanisms 
COG ID[COG1136] ABC-type antimicrobial peptide transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones3 
Plasmid unclonability p-value0.0000194458 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCTCTGG ATGATCTGTC TCTGGATATA TTGTCAGGAG AAATATGCTG CATTCTGGGA 
ACCTCCGGCT CAGGCAAATC CACCCTCCTG AATCTTCTGG CCGGCTTAGA GAAGGCGAGC 
AGGGGCAGCA TTCTAATGCG GGGAAAAAAC GTTGGAAAAA TGAATGAACG TCAACTGGCC 
CTGTTCAGGC AAAAGAACAT CGGCTTTGTT TTTCAATCGT ATAACCTTTT GCCATCCCTG 
TCAGCTCTGG AAAATGTGAG CCTGCCTTTA GTATTTCAGG GTGTTAAAAA AGAAAAAAGA 
GAGCAATTGG CCCGCGCCCT TTTACAGGAT GTTGGTCTCA AAACCCATCT TAAACATAAA 
CCGGCGGAGA TGAGCGGGGG ACAGCAACAA CGGGTAGGAA TCGCCCGGGC TTTTGTCGGC 
AGTCCCCCTA TTGTCCTGGC GGATGAGCCC ACCGGGAACC TGGATTCCAA GACCAGCCTG 
GAGGTAATTC AGCTTATGTT AAAGCTGGCC CGGGAAAAAC AGCAGACTCT GGTAATTGTA 
ACTCATGATA GCGAAGTGGC CAGTTTTGCT GATAAAACCG TATTTATACG GGATGGAAAG 
ATAGCGGAAG TCATAATGAA TAATACAAAT GTAGGGGAGA GAAGAGATGA AGTATAG
 
Protein sequence
MALDDLSLDI LSGEICCILG TSGSGKSTLL NLLAGLEKAS RGSILMRGKN VGKMNERQLA 
LFRQKNIGFV FQSYNLLPSL SALENVSLPL VFQGVKKEKR EQLARALLQD VGLKTHLKHK 
PAEMSGGQQQ RVGIARAFVG SPPIVLADEP TGNLDSKTSL EVIQLMLKLA REKQQTLVIV 
THDSEVASFA DKTVFIRDGK IAEVIMNNTN VGERRDEV