| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swol_0849 |
|---|
| Symbol | |
|---|
| ID | 4281962 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008346 |
|---|
| Strand | + |
|---|
| Start bp | 968609 |
|---|
| End bp | 970231 |
|---|
| Gene Length | 1623 bp |
|---|
| Protein Length | 540 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 638137718 |
|---|
| Product | flagellar M-ring protein FliF |
|---|
| Protein accession | YP_753539 |
|---|
| Protein GI | 114566385 |
|---|
| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG1766] Flagellar biosynthesis/type III secretory pathway lipoprotein |
|---|
| TIGRFAM ID | [TIGR00206] flagellar basal-body M-ring protein/flagellar hook-basal body protein (fliF) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAAAGCT TTGCGGAAAA ACTCAAGGAA ACAGCTGGGC GAGTCGCCGG CTCATGGCAA
AATATGAACT TGAACCAGAA AGTACTTGCC GGCGGAGGTA TATTGCTTAT TTTGGCGGCT
GCTATAATCC TGGTGATTAG CAGTTCCCGG GATACAGCTT ATGAAGTGCT ATATACGGAA
TTGGACAAAA AAGATGCTTC CCAGATAACG GCCAAGTTGG ATGAAGGCAA GGTGCCTTAC
AAGTTGGAAA ATGGCGGCAC TACCATACTG GTTCCTCCCG ACTTAAAGGA TAAAACCCGT
CTTACTCTGG CCAGCGAAAA CCTCCCCCGT GGGGAAACGG GCTTTGAGTT GTTTCAGGAA
AGCAAATTCG GGGAAACCCA AGTCGATAAA AAAGTTAAAT ACCAGGTAGC TTTGCAGGGG
GAATTGGCAC GCAGCATACA GAGTCTGGAC AAAGTGAAAG CAGCCAAAGT TAACCTGGCT
TTACCCGAGT CAACGTTGTT TTCCGATAAT GAAGAGCTGC CCAAAGCTTC GGTAGTTGTT
AATACCAGGG AGGAAGAAAA ACTCTCTCCC AAGGAGATTC AGGGGATAAT TAATCTGGTA
GCCAACAGTG TGGATAAGCT CACCACTGAA AACGTGGTGA TTGTTGACCA GCATGGAAAC
CTGGTATCGG AAAATTTGCC TATGGCGAAT GGAGATATCA GTGAAACAGT AAAATGGCAG
ATGGCCATGA AGAGGCAGTA TGAAAAGGAA AAACAGGATG CTATACAGAG TATGCTGGAT
AAGAGCCTGG GCCAAAACAA TTCGGTTGTC CGGGTTAATG CAGAATTGGA TTTTGATAAT
AAAGAACAGA AAGATGAGCT CTATTCCCAT GATGATGCTG GTCCTTTCGT AAGGAGCGAA
GAGATTAAAA AGGAATCCGG AACCGATACC ACCCAGCCTG TTGTAGGTGT ACCCGGAACC
GACACCAATA TTCCTCAATA CCAGGAAGTT GACGCTGCCG GTGGGGTGTC CACCTATGAC
AAGAGCAGCA AGATTAGGAA TTATGAAATA AACAAGACCG AGAAAGTAAC TAAAGTTGCC
CAGGGGGATG TCAAATACGA CTATTTGACA GTAGCAGTAC TGGTCAACAG TAAAGCAACC
GAGCCCTTGA AATTGGGTGA AACAGAAGAA GAAAAAATAG CTACCATCCG TAATATAGTA
GCCACTGCTT GTGGTCTGAG GGAAAATCGG AAAGATGAGA GTGTTCGCCT GGAAGATAAC
ATATCAGTGG CTTTTGTTGA TTTTTATACC GAACCCCAGG CGGAAGCTCC CGGGGGAACA
ATGGATCAAA TAATGCGCTC CCCTCTTACC CCGTGGTTAT TAGCGTTTCT AGTCGTCCTC
ATAATTCTCC TGGCTTGGTG GTTGATGCAG CGCCGAGAGA GAAGGCGGGC TGAGGAAGAA
GCAGAAGAGG CCGGCATTGA TACACTTATA CAGGAGGAAA TAAGGGTGGA AGACCTGATA
GAAACTGGCT TGAGTCCGGA AGAAAAAGAA AGACGCAAGA TCAGAGAAGA GATTGACCGG
ATTATTAATG AAAATCCGGA AATCGCGGCC CAGGTGCTCA AGACCTGGCT GGCAGAAGAA
TAG
|
|---|
| Protein sequence | MESFAEKLKE TAGRVAGSWQ NMNLNQKVLA GGGILLILAA AIILVISSSR DTAYEVLYTE
LDKKDASQIT AKLDEGKVPY KLENGGTTIL VPPDLKDKTR LTLASENLPR GETGFELFQE
SKFGETQVDK KVKYQVALQG ELARSIQSLD KVKAAKVNLA LPESTLFSDN EELPKASVVV
NTREEEKLSP KEIQGIINLV ANSVDKLTTE NVVIVDQHGN LVSENLPMAN GDISETVKWQ
MAMKRQYEKE KQDAIQSMLD KSLGQNNSVV RVNAELDFDN KEQKDELYSH DDAGPFVRSE
EIKKESGTDT TQPVVGVPGT DTNIPQYQEV DAAGGVSTYD KSSKIRNYEI NKTEKVTKVA
QGDVKYDYLT VAVLVNSKAT EPLKLGETEE EKIATIRNIV ATACGLRENR KDESVRLEDN
ISVAFVDFYT EPQAEAPGGT MDQIMRSPLT PWLLAFLVVL IILLAWWLMQ RRERRRAEEE
AEEAGIDTLI QEEIRVEDLI ETGLSPEEKE RRKIREEIDR IINENPEIAA QVLKTWLAEE
|
|---|
| |