Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swol_0835 |
Symbol | |
ID | 4281930 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
Kingdom | Bacteria |
Replicon accession | NC_008346 |
Strand | + |
Start bp | 953961 |
End bp | 954683 |
Gene Length | 723 bp |
Protein Length | 240 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 638137705 |
Product | sporulation sigma factor SigE |
Protein accession | YP_753526 |
Protein GI | 114566372 |
COG category | [K] Transcription |
COG ID | [COG1191] DNA-directed RNA polymerase specialized sigma subunit |
TIGRFAM ID | [TIGR02835] RNA polymerase sigma-E factor [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.935984 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATATTT TAGAGAGACT AAGGAACTGG CGTTTATACT TCATCAAGCT ATACCTTAAG AAGAAACTGC CCCGCTTTAT TCATTATATT GGGTCAACTG AAGTTCTTCC GGCACCGCTG CGTGAACAAG AAGAGATGGC CTTGATTTCC CAACTGGATC AGGGAATTAT GTCGGTAAAG GCAACCCTGA TCGAGCATAA TCTGAGGTTG GTAGTATATA TCGCCAAAAA ATTTGAGAAC ACGGGGATAA ACATTGAGGA CTTAGTTTCC ATTGGCACTA TTGGACTGAT TAAAGCGGTT AATACTTTTG AACCCAAGAA AAATATTAAA CTGGCTACTT ATGCCTCTCG TTGTATTGAA AATGAAATAC TTATGTATCT TCGCCGGAAT ATAAAAAATA GGGTGGAAAT ATCCCTGGAT GAACCTTTAA ATGTGGATTG GGATGGTAAC GAACTTTTGC TTTCAGATGT CTTGGGTACC GAAAATGATA TGATTTATAA ACAAATTGAG GGTGAAGTGG AAAAAAGCCT TTTGTGGAAA GCTATGCACA AGCTAAATAA TCGGGAAAAG ACTATTATTC AGCTTCGTTT TGGCTTGGCC GATGGAGATG AGAAAACGCA AAAGGAAGTA GCCGATATTT TGGGGATTTC CCAGTCCTAT ATTTCTCGCC TGGAAAAACG GATTTTGAAA AGGCTGCAAA GGGAGATTCG CAAAATTGAA TGA
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Protein sequence | MDILERLRNW RLYFIKLYLK KKLPRFIHYI GSTEVLPAPL REQEEMALIS QLDQGIMSVK ATLIEHNLRL VVYIAKKFEN TGINIEDLVS IGTIGLIKAV NTFEPKKNIK LATYASRCIE NEILMYLRRN IKNRVEISLD EPLNVDWDGN ELLLSDVLGT ENDMIYKQIE GEVEKSLLWK AMHKLNNREK TIIQLRFGLA DGDEKTQKEV ADILGISQSY ISRLEKRILK RLQREIRKIE
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