| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swol_0739 |
|---|
| Symbol | |
|---|
| ID | 4282856 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008346 |
|---|
| Strand | - |
|---|
| Start bp | 843518 |
|---|
| End bp | 844483 |
|---|
| Gene Length | 966 bp |
|---|
| Protein Length | 321 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 638137611 |
|---|
| Product | site-specific recombinase XerD-like protein |
|---|
| Protein accession | YP_753432 |
|---|
| Protein GI | 114566278 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG4974] Site-specific recombinase XerD |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACAGAC CAATATTCCA TTCTGTTTTT GCAGATGAGA TGAATTCCTA TCTGGATTAC
AAAATGTCTT CAGGCTACAA AGCTGTTAGT TTCTATGTCA ATCTGCGACA CTTTGATCGT
TTCTGTGTCC AGCAGGAAAT TAAAGAGCCT GTATTCACTA CAGACAACGC AGTAAAGTGG
ATACAGAAAA AGGGTACCGA AGGCACGACC ACGCATTATT CCCGGGTTAA TGGAATCAAA
CAGTTTCTCA TATTTCTCAG CAGAAAAGGC TATGATGTTT TTATCACCAG AGATATCAAG
TTTAAGCCCA CAGAATTCCA ACCCCATATT TATACAGATG CTGATATAAG AAGATACTTC
CATGCAGTAG ATACCTATGA ATCTGCCCAA AACCGCAAGA ATGCAATCCA ATACCCGGTC
CTATTTCGCC TGCTGTATTG TTGTGGGACA AGAATTAATG AGACCCTAGG AATACGAAAA
AAAGATGTGG ATTTGGAGAA TGGGATTATC AAGCTTTTTG AAACCAAGAA TGACTGTGAG
CGCTATATCA TACTGGGAGA TGATCTTCGG GTACTAATGA AGCAGTTTGC GGAAAAATGT
TTTTATCTGC TGGGTGACGA GGACTATATT TTCACTACTT CTAATGGAAG CAGAATAAGT
GGGGATGTTC TTTATGAGGT ACACAGGTTA TTTCTCCAGC AGGCTGGAAT TCCTTATCTT
GGAGGAGGAA AAGGTCCCAG AGTCCACGAC TGGAGACATA CCATGGCCGT GCGTTCTTTC
AAGCAGATGA TTGATGCTGG CATGGATATG TATGTGTCCC TTCCGATCCT GTCTACATAT
CTGGGACATA AAACGATATT TGCAACAGAA CGTTATGTAA GGCTTACCAT GGCCATTTAT
CCGTATATTG AGGATAAGTT CAGGTCAAAA ATAGCGAGGG TGTTCGGGGA GGGAGCAGCG
TTATGA
|
|---|
| Protein sequence | MNRPIFHSVF ADEMNSYLDY KMSSGYKAVS FYVNLRHFDR FCVQQEIKEP VFTTDNAVKW
IQKKGTEGTT THYSRVNGIK QFLIFLSRKG YDVFITRDIK FKPTEFQPHI YTDADIRRYF
HAVDTYESAQ NRKNAIQYPV LFRLLYCCGT RINETLGIRK KDVDLENGII KLFETKNDCE
RYIILGDDLR VLMKQFAEKC FYLLGDEDYI FTTSNGSRIS GDVLYEVHRL FLQQAGIPYL
GGGKGPRVHD WRHTMAVRSF KQMIDAGMDM YVSLPILSTY LGHKTIFATE RYVRLTMAIY
PYIEDKFRSK IARVFGEGAA L
|
|---|
| |