| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swol_0649 |
|---|
| Symbol | |
|---|
| ID | 4281594 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008346 |
|---|
| Strand | + |
|---|
| Start bp | 742974 |
|---|
| End bp | 744812 |
|---|
| Gene Length | 1839 bp |
|---|
| Protein Length | 612 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 638137526 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_753347 |
|---|
| Protein GI | 114566193 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3894] Uncharacterized metal-binding protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.891312 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCGGAAA GGACAAAAAT CACATTAAAA AGCCCTGACA GGCCGCCTAT GGAGTTTTGG
ACCCTGGCAG GTAAAAACCT CTGGGATAGC ATAATGACGA GCGGAATGGT CTCCCCAGGG
GCCTGTGGCG GCAAAGGGAA TTGCGGGCAG TGCAAGGTTA AGCTGGAAGG AGAGATTGAT
GAAATCAGCG ATAGCGAACG GCAGTATCTC CTTCCGGAAG AATTAAGAAC CGGCACCCGC
TTGGCTTGTT TTTGCCGGGT TAAAGGGCCC TTAACGGTTT ATCTGGATCC TCTGGCTCTG
GCTATACAGG ATCAAGCCTG GCTAAAGAGC GATTCTCCCC CGGTAGCTTT TTCCGCTCCG
GTGAAGAATC GCCAGGTACT GATTCCAGGA ATGGAGAAGG ATTCTCCGGT TCCTCTCCTT
ACGCGCCTGG CGCGGGCCCT GCCCGGCTTA AAGTTGGAAT TGACCGTTGA CAATTTAAAC
CAGCTGGCAC AAATCGACCG TATTGGGCGA CCGGCCTTGG AACTACAAGC CCTGGTATTT
AAGGAGCAGG CAGTAAAATA TATCGGGCGT AAAAGAGAAA AAGCCTGTGG CCTGGCCCTG
GATATAGGCA GCACCAGCCT TTTTGCCGTC ATGTTAAATC TGGAGGACGG GCAGCATTTG
GCCATTTCCA CCAAACCCAA CATGCAGAGG GTATACGGCG CTGACATACT ATCCCGTGTG
CTTCACTGTC TGGAAAATCC GGATGGTTTG GAGCGATTGC AACAGATATT GCTGAATAAC
CTCTCCAGTA TGATTGAGGA AATGCTGGAA GAGACCGGAA CTTCACCGGA GCATATATAC
TACCTGGTAT TGGTGGGCAA CCCGGTCATG TTGCACTTTT TTCTCGGGTT AAATCCGGCA
GGATTTGCCC AGGCACCATA TGCCGGTATT TTTTGTGACG AATTCACTTA TCCGGCAGCC
GGTCTGGGGC TTCCGGTAAA CCCGGAGGCG GAAATCCTGC TCCTTCCTCA AGTGGGGGGC
TTTGTGGGCG CAGATACCGT GGCTGCTGTC TTAAGCCTGC CCGACTGGCG GAGCAGTCGT
TTTTTGCTGG TCGATATCGG TACCAACGGT GAAGTTGTAG TGGGAAACCG GGGTAAACTA
TGGGCGGCTT CAGCTGCTGC CGGTCCTGCC TTTGAAGGTG GTGGAATAAG CAGTGGAATG
ATTGCTGGAG ATGGCGCCAT CGACAAGATA TGCCTTAACC CAGAAGGGGG CCTGGAATAC
AATCTTATTG GCGATAGCCC GGCCCGGGGG CTATGTGGTT CAGCTATTAT TGATATAATA
GCCAGCCTGC GCCAGGGAGC TTACATAGAT AGTAACGGAA TAATCACTGA GCTGGCTGGG
GAGAAACTGA GAGTGCGCCA GGGGGAAAGG GGAGCAGAAA TAATCCTGGT AGAAGAAAAC
GAATCCTTCC GAGGAGCTCC GGTAGTTTTC AACCAGGAGG ATATAAGGCA GGTGCAGCTG
GCCAAGGCAG CCTTAAGGAC AGCTATTGAT GTATTGATGA AAGAGGCGGG ATTAGAGTAT
AAGAAGCTGG AAAAGGTTTA CCTGGCCGGG GCTTTTGGCA ATTACCTGAA TCCCCATAAT
GCGATTGATA TAGGCATGAT TCCCCCGATA AAAACGGAGA CAATAAGGAA TATTGGTAAT
GCCGCCGCTG CCGGGGCTAT TGCGGCATTA TTATCCCCGG ATAAACAGCG GGAAGCCCGC
GAAATAAAGG AACAAGTGCA TTATGTTGAA CTCGCCCTAT ACCCCGATTT CCAGTCCCTC
TATCTCAATA ATTTGAATTT TGACCCTGCT GCCAAATAG
|
|---|
| Protein sequence | MAERTKITLK SPDRPPMEFW TLAGKNLWDS IMTSGMVSPG ACGGKGNCGQ CKVKLEGEID
EISDSERQYL LPEELRTGTR LACFCRVKGP LTVYLDPLAL AIQDQAWLKS DSPPVAFSAP
VKNRQVLIPG MEKDSPVPLL TRLARALPGL KLELTVDNLN QLAQIDRIGR PALELQALVF
KEQAVKYIGR KREKACGLAL DIGSTSLFAV MLNLEDGQHL AISTKPNMQR VYGADILSRV
LHCLENPDGL ERLQQILLNN LSSMIEEMLE ETGTSPEHIY YLVLVGNPVM LHFFLGLNPA
GFAQAPYAGI FCDEFTYPAA GLGLPVNPEA EILLLPQVGG FVGADTVAAV LSLPDWRSSR
FLLVDIGTNG EVVVGNRGKL WAASAAAGPA FEGGGISSGM IAGDGAIDKI CLNPEGGLEY
NLIGDSPARG LCGSAIIDII ASLRQGAYID SNGIITELAG EKLRVRQGER GAEIILVEEN
ESFRGAPVVF NQEDIRQVQL AKAALRTAID VLMKEAGLEY KKLEKVYLAG AFGNYLNPHN
AIDIGMIPPI KTETIRNIGN AAAAGAIAAL LSPDKQREAR EIKEQVHYVE LALYPDFQSL
YLNNLNFDPA AK
|
|---|
| |