Gene Swol_0534 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwol_0534 
Symbol 
ID4281263 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophomonas wolfei subsp. wolfei str. Goettingen 
KingdomBacteria 
Replicon accessionNC_008346 
Strand
Start bp633974 
End bp634396 
Gene Length423 bp 
Protein Length140 aa 
Translation table11 
GC content43% 
IMG OID638137418 
Producthypothetical protein 
Protein accessionYP_753239 
Protein GI114566085 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG2165] Type II secretory pathway, pseudopilin PulG 
TIGRFAM ID[TIGR02532] prepilin-type N-terminal cleavage/methylation domain 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTCAAAT TTTTGGATTT GGGCCAGCGA AAAGTTGGAG AAAAAGGTTT CACCCTGGTG 
GAATTAATCC TGGTCATGGC TATCGTAGGT ATTTTAGCTG GACTGGCAGT GCCCCGTTTC
ACAGGTGTTT TAGAAACGGC CAAGGAAAAA GCTGATGAGG CTAATAAGAA GATAATAAGA
GAAGCCGCCG AACTTTGGTA TATGCAGACT GGACAAACTG GGAAAATACC GGAAAATGGA
AACGCGGTTC CGCTTTCCAA TGATACTTTT TTTAGAGCAG AAGGCCAGAC GGGAGAAAAG
CTGGTGCCGG ATTTTCTCAA AGAGATTCCC GAGAACCCAA TGGATACAGG TGAATATAGA
TTAAAGATTG ATGAGGGTGG TAAGGCAATA GTAACTCATG CTAAGGATAC GGCAAAAGAT
TAA
 
Protein sequence
MLKFLDLGQR KVGEKGFTLV ELILVMAIVG ILAGLAVPRF TGVLETAKEK ADEANKKIIR 
EAAELWYMQT GQTGKIPENG NAVPLSNDTF FRAEGQTGEK LVPDFLKEIP ENPMDTGEYR
LKIDEGGKAI VTHAKDTAKD