| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swol_0511 |
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| Symbol | |
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| ID | 4281664 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008346 |
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| Strand | + |
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| Start bp | 599833 |
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| End bp | 604569 |
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| Gene Length | 4737 bp |
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| Protein Length | 1578 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 638137395 |
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| Product | helicase |
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| Protein accession | YP_753216 |
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| Protein GI | 114566062 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1205] Distinct helicase family with a unique C-terminal domain including a metal-binding cysteine cluster |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.769472 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATATTTA GACCAGCAGA AAGTTCAAAA AATATAGTGG ACTTTTACCG TAATTATTTG
CTTACTACAT TTCAGACGAA TAATGAAAAC TATAATCGCC AACTGCAAGA ACAGTTGGCC
GTAGATGGTA CGATTGCTAA TGGCCCTTTT ATTAGTTTAA ATGATTCCTT TGCAAAAGAA
GAATCCCTCC GAGATTTAGT AGACAAGCGT ATCATTTCAA GAGAATTGTT GAAGATCACG
GCAATGCATC TGGATCGCAA TTTATATAAG CATCAGACAG AAGCAATTCG AAAAGCTAAT
GAAGGCAAAA ATCTAGTTAT TACCACAGGT ACAGGTTCCG GTAAAACAGA ATGTTTTTTA
ATTCCAGTCA TCAATCATCT TATACGTGAA AAAGAAGCTG GGACATTAGG GAAGGGTATT
CGTACACTTA TTATTTATCC TATGAATGCC TTGGTCAATG ACCAGATACG TCGTTTGCGT
GAACTATTTA ATGAATGTGG AGATTTAGAT ATAACCTTTG GAAAGTTTAC AGGCGAAACA
CAAGAAAAGT TTTCTGACGC TCGTAAAGAA TATATGGAGC GTGAAGGAAG TGCACCTGGA
AAAAATGAAT TGATATCCCG TGAACAAATG CGGACCACAC CCCCTAATAT TCTTATAACT
AACTACGCTA TGTTAGAATA TCTGCTCCTT AGACCGGGTG ACAATGTGTT CTTTAATGAG
CAAAATGCCA TTAACTGGCA CTCTATTATA ATTGACGAAG CGCATACATA TGGTGGGGCA
AAAGGTATTG AGGTTGGATC GCTGATTAAG CGTGTAAAGG CTATGCTTGC TCGAAACGAT
ATTCAGTTCA TTCTTACTTC AGCAACCTTG GGCGATGAAA AATCAAACTC TGAAATTATT
AAATTTGCAG AGGCCTTGTG CAACGCCAAA TTTGATGATA GTTCCATTGT GCGCGCATAT
ACAATTGCTC CACAAAAAGT GTCTGATGTT CATCTCCTTG ATTTTTCAAT TTACCGTGAC
TTGGCAGAAA AAATCCGAAA CAACATATCT GCAAAAGAGA TTCTTTATTA TCTCAATAAG
CGTAATATTG CCATTCTTTC CGATATATCG GAAGAAAAAA CTTTGGAAAG AACTCTGTTT
TCAATGATCC TACATGATGA GTTCTATTAT AAAGTTAGAA TTAAATTACT CAATCGAATA
AAGCCATTAA ATAAATTGGC AACTGAATTG AATCTACCTG TGCAAGATGT AACCGACTTC
ATTGCTGTTG CTTCTAATGC TCAAATTGAA GGAAATAAAA TATTTGAAGC TCGCTATCAT
ATGTTTCTTC GGGGGTTGGA AGGCATATTT ATTACTCTCA AGCCAAGCAA CAAACTGTTC
GTAACCAAGA TGGAAACATA TAAAGAAGAT CCTTTTAGCA ATGATTGTGG ATACAAAGCC
TACGAGATTT CTTTTTGTCA TAATTGCAAT GCATTATTTA TCATTGGTCA AAAGGAAGAT
GGCCATTTAG TTCAAAAGAA TAAGTTCAAT GCCGATTATG ACCCAGAGGT ATATTTGCTG
GATGGCGATT ATGAGGGAGA TGATAACGAT GAGGACGAAG AAGCGAAAAG CTATATTGTC
TGTGCAAAAT GTGGTGCTAT TAAACGTTCT ACATCCATAG ATGATTTAAC TTGTGGACAC
GGGAAAGAGA ATTATAATCG CCTCATTAAA GTCAAAGATA AGGGTACAAA ATTACATACC
TGCCCATGTT GCCATACTAT TAATACACAG CGCAGTATCA TGCGTCCCTA TTTTTTAGGT
AATGAAGCGT CAACTGCTGT AATTGCGACT GCTTTGTATA ATGAGCTGCC TAACACTAAA
ATTACAAAAG AGACTGTCAA ATTTGAAGAT GATTTCTTTG GAGAAAGCTC AAAAAAAATA
ATTGAAAAGC GTGAGCATAT TGTAAAGCAA TTTCTAACTT TTTCGGATAA TCGCCAGGCG
GCAGCTTTTT TTGCATCATA TCTCGAGACG ACCTATCGAG ATAATCTTGT TAAAAGGTTG
ATGACCAGAG TTTGTGAGGA CAATGCCCAG GCTATGGCAA GTGGAATATC ACTTGAGAAT
TTTGTGGATC ATTTGGAAGC TATCATGGCT GAATATAGAA TTTATGCGCA AGATAATCGC
CACAAAGAAG CATGGATTGC TGTAGCAAAA GAGACGATAA ATTATAAGGC CAAAAACTCA
TTGCAGAATA AGGGCATCTT ATTCTTCGAT GTAGATATTG ACATGCCTGC TAACAATAAA
CTTAATCTTT CAGCGCATGA AACTACGGAT CTTTTTAAGA TCTTTGCTCG CTATTTCATA
AAAAACGCAG CCATTAAATT TCCTATTAGT TTAACTAGGG CTGATGATCA AAGATTAACA
TTCAATGGAA TCACAATTGG CTTTGATTTA AGTTCATCAT CAAAAAGTTA TATTCAAGCA
TGGGTACCGG CCGCTGGAAG AGAAAATATT CGCACCAAAT TGCTGCAAAA AATATTTCCA
GATAAAGATG CTGCTTTTAT TTACAAATTA CTTGAATCTC TTTGGTATGC ATTAAATACG
AAGGGAATTA TTTCTTACTA TGATGAAAAG TTTATGCTGT CATCTTCTGC AATAAAGGTT
AAGGCAGTAC AGGTATTATA TAAATGCAAT GAATGTAAAA CAATAACTCC ATATAATATT
CAGAATATTT GTCCAAACCC TAAATGTACT GGGGATTTAC AAACTTTTGA TTTTAAAAAG
ACAATTCATA GAGACCATTA TTACAATGTC TTTCGTAATT TAAAAATCGA TGACCTTATT
GCCAAAGAAC ATACTGCCCA ACTTGGCAGT GAAAAAGCAT ATACCTATCA AAATGATTTC
AAAAATGAAA AGATTAATGT ATTAAGTTGC TCGACCACAT TTGAGATGGG TGTGGATGTT
GGTTCTCTAG AAACAGTATT TATGCGGAAT ATGCCACCAT CTCCAGCAAA TTACGCACAG
CGCGCAGGTC GCGCAGGTCG TAGTTTAAAA TCTGCTGCTT ACTCATTGAC ATATTGTCCC
AATAACTCCC ACGATCTAAA TTACTTTAAA CAACCGCTTT CTATGATTAA AGGTACAATT
CAGCCACCTG CATTTAATGT TAGCAATGAA AAAATAGTTT TACGACATAT CTTTGCATCT
GCCTTTTCGT TTTTTTGGAA AAAGTGTCCC GAACTCTACA AAAAATATGT TGGAGAATTC
TTCGATCTAG ATGGTTACGG AGAATTTAAA GCTTATTTAA ACTCACATCC TAAAGATCTC
CACCAGTATC TTAAACATGT TGTTAGTGTT GATCTTTATG ATTATTTTGG CATTGAAGAA
TTCAGTTGGA TTAACCGCCT TTTTAATATT GACGAAATAA ATCCAGGCGT TTTTGTTATA
GCACGTAGAA AATATGATTT AGATCTTCAG GATCTTGAAA AGGCGAGAAA TGTCTGTGTG
GAAAGACAAA AAACAGCAAA ACCAGGCTCC AAAGAAGAAA AAAATCTTAA TTGGAAAATC
ATATCTATCG GCAATTCAAT CAATACTGTT AGAAACCAAC AGATGATTGA GTTTTTATCT
CGAAACAATC TCATACCAAA GTATGGTTTT CCAGTTGATA CTGTAGAATT AAAAAGCTCC
GGAAAGGGCG GCGTATTAGA TTCGCTTAGA CTGGATCGGG ATTTGTTTTC AGCTATTTCC
GAGTATGCTC CCGATTCGGA AGTCGTGGCA GACGGTAAAC TGATTACGAG CAGGTATGTG
CGTGTCCTTA ATGGATATGC ATGGCCAGAA TTTAATTATT CAGTATGTGA GCATTGCCAT
ACTTTAAACA AAACACTTTG GATAGAAGAA TCGCTCAAAA ATTGCAAGCA ATGTGGATAT
GAGCTGCCAA TTATCAAAAA AAAGTATATC ATTCCCAAGT TTGGCTTCAT TACAGAGAAT
GGCGAACCTA AAGATGCGAG GACAGATAAA CCCGAACGAA CTTATAAAGG TTCTATTTCA
TATATAGGTG ATGAAAACCA TATTGAATTT AATAATTATG ATATCTGTGG TAAAAGAGTG
GTTGTTGGTA GTAGCAAAAT GGACGAGCTA GCAGTTTTAA ACACTTCTGC TTTCTATATT
TGTAAGTCCT GTGGATATGG TATAGTCAAA GATGGGTGTT ATGATTCTGC TTTTGAAAAG
CCACACCAAA AGCCTGACGG ATATCCTTGT AATAATAAAC TGTATCCATA TTCGCTGGGG
CATGAGTTCC AAACCGATGT TGTTTTGCTG AAGTTTATTT CAGAGAACAT AATGGAATTA
AATGCAGCTT GGACAATTTT ATATTCTTTG TTAGAGGGAT TGAGCCGTCA TCTATGTATT
GATCGAAATG AACTTTCCGG TTGTTTGCAT TGGTATCGTA ACGAAGCATT TGGTGATCGC
GGAAACTTTG GATTCATACT ATTCGATAAC ACACCCGGTG GAGCGGGATA TGTACGGCAA
CTACATAGTG TATCCACTTT TGTAAAAATG TTGGAGTGTG GAGCAGACAT TGTTAACAAT
TGTGAATGTG GTGGAAATGA AGCTGATACT GCTTGTTATA GCTGCTTGTG CAATTATTAT
AACCAAAGGC AGCACGAGAA TTTAAAACGC AAGCTTGCAA TCGATTTCTT TAGCTCTGTT
AAAAATGGAA ATACTATGTG GTTTGGCAGT ACTATTCTAG ATAAGGAGTT CAGATAA
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| Protein sequence | MIFRPAESSK NIVDFYRNYL LTTFQTNNEN YNRQLQEQLA VDGTIANGPF ISLNDSFAKE
ESLRDLVDKR IISRELLKIT AMHLDRNLYK HQTEAIRKAN EGKNLVITTG TGSGKTECFL
IPVINHLIRE KEAGTLGKGI RTLIIYPMNA LVNDQIRRLR ELFNECGDLD ITFGKFTGET
QEKFSDARKE YMEREGSAPG KNELISREQM RTTPPNILIT NYAMLEYLLL RPGDNVFFNE
QNAINWHSII IDEAHTYGGA KGIEVGSLIK RVKAMLARND IQFILTSATL GDEKSNSEII
KFAEALCNAK FDDSSIVRAY TIAPQKVSDV HLLDFSIYRD LAEKIRNNIS AKEILYYLNK
RNIAILSDIS EEKTLERTLF SMILHDEFYY KVRIKLLNRI KPLNKLATEL NLPVQDVTDF
IAVASNAQIE GNKIFEARYH MFLRGLEGIF ITLKPSNKLF VTKMETYKED PFSNDCGYKA
YEISFCHNCN ALFIIGQKED GHLVQKNKFN ADYDPEVYLL DGDYEGDDND EDEEAKSYIV
CAKCGAIKRS TSIDDLTCGH GKENYNRLIK VKDKGTKLHT CPCCHTINTQ RSIMRPYFLG
NEASTAVIAT ALYNELPNTK ITKETVKFED DFFGESSKKI IEKREHIVKQ FLTFSDNRQA
AAFFASYLET TYRDNLVKRL MTRVCEDNAQ AMASGISLEN FVDHLEAIMA EYRIYAQDNR
HKEAWIAVAK ETINYKAKNS LQNKGILFFD VDIDMPANNK LNLSAHETTD LFKIFARYFI
KNAAIKFPIS LTRADDQRLT FNGITIGFDL SSSSKSYIQA WVPAAGRENI RTKLLQKIFP
DKDAAFIYKL LESLWYALNT KGIISYYDEK FMLSSSAIKV KAVQVLYKCN ECKTITPYNI
QNICPNPKCT GDLQTFDFKK TIHRDHYYNV FRNLKIDDLI AKEHTAQLGS EKAYTYQNDF
KNEKINVLSC STTFEMGVDV GSLETVFMRN MPPSPANYAQ RAGRAGRSLK SAAYSLTYCP
NNSHDLNYFK QPLSMIKGTI QPPAFNVSNE KIVLRHIFAS AFSFFWKKCP ELYKKYVGEF
FDLDGYGEFK AYLNSHPKDL HQYLKHVVSV DLYDYFGIEE FSWINRLFNI DEINPGVFVI
ARRKYDLDLQ DLEKARNVCV ERQKTAKPGS KEEKNLNWKI ISIGNSINTV RNQQMIEFLS
RNNLIPKYGF PVDTVELKSS GKGGVLDSLR LDRDLFSAIS EYAPDSEVVA DGKLITSRYV
RVLNGYAWPE FNYSVCEHCH TLNKTLWIEE SLKNCKQCGY ELPIIKKKYI IPKFGFITEN
GEPKDARTDK PERTYKGSIS YIGDENHIEF NNYDICGKRV VVGSSKMDEL AVLNTSAFYI
CKSCGYGIVK DGCYDSAFEK PHQKPDGYPC NNKLYPYSLG HEFQTDVVLL KFISENIMEL
NAAWTILYSL LEGLSRHLCI DRNELSGCLH WYRNEAFGDR GNFGFILFDN TPGGAGYVRQ
LHSVSTFVKM LECGADIVNN CECGGNEADT ACYSCLCNYY NQRQHENLKR KLAIDFFSSV
KNGNTMWFGS TILDKEFR
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