| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swol_0507 |
|---|
| Symbol | |
|---|
| ID | 4281660 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008346 |
|---|
| Strand | + |
|---|
| Start bp | 592963 |
|---|
| End bp | 594228 |
|---|
| Gene Length | 1266 bp |
|---|
| Protein Length | 421 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 638137391 |
|---|
| Product | UvrD/REP helicase family protein |
|---|
| Protein accession | YP_753212 |
|---|
| Protein GI | 114566058 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0210] Superfamily I DNA and RNA helicases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATCAACC GGCTTGTCGA GTTGCTAATT CGGGAGAACC CATCAATTCT CAAAGCCTTG
CATCTCACAT ATCCGGTCGT GTTTCTCGAT GAATTTCAGG ATACAACCTT TGCTCAGTTT
CAGCTTCTAC ATACCGCATT TGATGGCAGT GAGACTATCT TCACTGCTGT GGGGGATGAC
AAGCAGCGAA TCATGGTGTG GGCGGGCGCT ATGCCAGACG CTTTCAGCCA GTTCGAGCAG
CAATTTGATG CACTAAGGAT TTCTCTGATC TTCAATTGGC GCTCACATGA GGACCTTGTC
CAGATTCAAC ACGTCATTGC CAGCAGGATA GATCCTAACG TCGAAGAGCC CGAGGCTCGC
GCTGACCGGT TGGTTGACGG TGATATTGCG GGGATTTGGG AGTTTGCGAG CGAGGATATG
CAAAGCGATT ATCTCGCAAA ATGGATCGAG GGCGAGGTTC AGGCGGGCTG TATTGAACCG
CATGACGTAG CTATTCTCGT GCGCATGCGC CCTGATTTAG TGGAAAGTCA GCTTTCACCC
ACATTCGAAG CGAATGGTCT CAGATTGCGG AATGTCGCCC GTACTGTGGG GGACATTGCT
ATCCAGGACT TGTTAGGAGA AGAATTGACA CAGATACTAT TACGGCTACT GCGACTTGGC
GCAACAAAGA GAAGTCCTGA GAACTGGAAC GCTTCCTTGC GGGATTTACA GTTTCTAGAA
GCGGTTGAAC CAAATGATGA GGAAGGACTA CGGCGTCTAC AGAAGCGCCT TCAAGTGTTT
ACCCGCGAGA TTCGGCGAAC AATGCAGCAT CTTGAACCCG AACCAGATTC TGCAACTGAA
ATCACGCGTG CAGCCCTCGA TTTCATTGGA GATCAGGTCC TACGCCGAGC TTTTCCTTCC
TATCAACGTC AGCATGATTT TGATCGTGTC TGGAATGGAT TTCTGCTGCT CTTGCGGGAG
TGCCTCGTTA ACACTGAAAC GTGGTCAGGT ACACTTGATG AATTCGAGGG AATAGGTCAA
ACCGCACTTA TGACGATCCA TAAGAGCAAG GGCCTTGAGT TTCATACTAT GATTTTTTGT
GGCCTCGACA ATCAGACCTG GTGGAGCCTT ACACCCAACC GTATGGAAGA ACTGAATTCA
TTTTTCGTGG CTTTTACCCG TGCGCGTCAA AGAGCCTTCT TTACATTGTG CAAAGATCAA
GGTCGGACAG TTGCTTGGAT TGAAAACCTA CTTACTTCCG CTGGAGTTCA GAAACGATTT
CTATGA
|
|---|
| Protein sequence | MINRLVELLI RENPSILKAL HLTYPVVFLD EFQDTTFAQF QLLHTAFDGS ETIFTAVGDD
KQRIMVWAGA MPDAFSQFEQ QFDALRISLI FNWRSHEDLV QIQHVIASRI DPNVEEPEAR
ADRLVDGDIA GIWEFASEDM QSDYLAKWIE GEVQAGCIEP HDVAILVRMR PDLVESQLSP
TFEANGLRLR NVARTVGDIA IQDLLGEELT QILLRLLRLG ATKRSPENWN ASLRDLQFLE
AVEPNDEEGL RRLQKRLQVF TREIRRTMQH LEPEPDSATE ITRAALDFIG DQVLRRAFPS
YQRQHDFDRV WNGFLLLLRE CLVNTETWSG TLDEFEGIGQ TALMTIHKSK GLEFHTMIFC
GLDNQTWWSL TPNRMEELNS FFVAFTRARQ RAFFTLCKDQ GRTVAWIENL LTSAGVQKRF
L
|
|---|
| |