Gene Swol_0408 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwol_0408 
Symbol 
ID4281241 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophomonas wolfei subsp. wolfei str. Goettingen 
KingdomBacteria 
Replicon accessionNC_008346 
Strand
Start bp483213 
End bp483977 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content43% 
IMG OID638137296 
Productnitrogenase 
Protein accessionYP_753117 
Protein GI114565963 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1348] Nitrogenase subunit NifH (ATPase) 
TIGRFAM ID[TIGR01287] nitrogenase iron protein 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGAAAA TTGCTATTTA CGGGAAGGGT GGAATCGGCA AATCGACTAT TGCCAGTGCT 
TTATCGGCAT CTATTTCTCT TTTGGGTTAT AGGGTAATGC AGATTGGTTG TGATCCCAAG
GCTGATTCAA CTATCAATCT TACCCACGGG TTGACCGTAA CCCCAGTTAT GAATTATCTT
GCCCGAAATG GAATATGTTC CTCGTTGGAG GCTATTGTGG TTGAGGGCTT TAACGGCATC
GCATGCGTAG AGACCGGCGG CCCTACTCCC GGACTTGGTT GTGCTGGCCG GGGCATTATT
ACTACTTTCA ATATTTTGGA TGACCTAAAT GCCTATGAGA TTTATAAACC AGATTTTGTT
TTATATGATG TTCTGGGTGA TGTCGTGTGT GGAGGATTCG CCATGCCCAT ACGGCATGGA
TATGCAGATG AGGTCATTAT TGTAACATCT GGAGAAAAAA TGTCGCTGTT TGCTGCCAAT
AATATTAAAA ACGCAATTGA TAGTTTTGCT GAACGTAAAT ATGCCCGACT GCGAGGTCTA
ATACTAAATC GGCGCAATAT CGACGGCGAA GAGCATATCG TTCAAGAATT CGCACGAGAA
ATAGGAACGA AAGTCATAGG CGATATTCCT CGTGACAGCA ATATTCAATT GTACGAGCAG
CAGAATAAAA CCGTGGTGGA GGGAGATCCT AACCTGGATA TCTCGCAAAT GATTATGAAG
ATAGCAGCAA ATATTGTTAA TGATGCGGGG GTAAGTAATG CATAA
 
Protein sequence
MKKIAIYGKG GIGKSTIASA LSASISLLGY RVMQIGCDPK ADSTINLTHG LTVTPVMNYL 
ARNGICSSLE AIVVEGFNGI ACVETGGPTP GLGCAGRGII TTFNILDDLN AYEIYKPDFV
LYDVLGDVVC GGFAMPIRHG YADEVIIVTS GEKMSLFAAN NIKNAIDSFA ERKYARLRGL
ILNRRNIDGE EHIVQEFARE IGTKVIGDIP RDSNIQLYEQ QNKTVVEGDP NLDISQMIMK
IAANIVNDAG VSNA