| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swol_0353 |
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| Symbol | |
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| ID | 4281473 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008346 |
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| Strand | + |
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| Start bp | 423716 |
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| End bp | 426787 |
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| Gene Length | 3072 bp |
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| Protein Length | 1023 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638137244 |
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| Product | putative CheA signal transduction histidine kinases |
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| Protein accession | YP_753065 |
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| Protein GI | 114565911 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0643] Chemotaxis protein histidine kinase and related kinases |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCAATA GCCTAAAAAG CAGATTTATT ATAGTAGTAT TTACCGTTTG TTTTTGTTGC
TTATTAGTGG TATCCCTGGT TAGCTACTAT AATTCCTATA TTCTGGTCAG AGAAGAAACC
AACCAGGTAG CTCATGAAGC TGTAAACAGG TATGCTTCCG AGCTGAACAA CTGGTTTATG
CAGCAAGCGG GGGTTCTGCA CGCTATATCC CAGGACATCG AAATAAACCG GGACTTTTCC
GATGAATATT TATCTCTTTA CCTCATGGAA AAATTCCAAC GACGCGATTC ATGTGTCATA
GATTATTATA TCGGCTTTGC TGATAGTAAT AGGAAAATGG TTTGTGCTAC CGGATGGGTT
CCACCGGAAG ATTATGAGGC AAGTACGCGG GAATGGTATA AAGAAGCGGT AAAAAACAAT
AAATTAGTCT ACATAACCCC TTACCTGGAT GCCGACACCA AAGAAATGGT TATTACCCTG
GCCGATCCGA TAAGAGATGG CGACAGGTTG CTGGGGGTAT TGGCTGCGGA CATATTGCTT
ACCGATGTAA TGAAACTGGC TCAAGATGTA CATATTGATA AAGAACACTA CAGTTTCTTA
CTGGATGATT GCTATAATTT CATAGTTCAT CCTCATCCGG ATTTTCAGCC GCTGGCCTCG
GAGTCGAGAA ATGCTTCCCA GGTTATGCAG GGTTTGTATC GCCCGCTAAC AGAGCAAATC
CAGGAGGGAC GCTACCCGAT TATTGAACTA AAGGATTACG ATAATAGCAA GAGGTGCTTT
GCTTTAAGCG AAATCAAGGA GACTGGATGG ACCTTTGGTA TTGCTATCCC ACATTCGGAA
TATTTCGGAC CCCTGAAAAA GTTATGGTAT GGTTTTGCCC TGGCTCTGGC CATTTCCCTC
TTTATTGGTT TTATCATTAT ATTACCGGTG GTGCGGAGCT TGCTCCGTCC CATTGAAGAC
TTGCATCAAG CCGTAGGGCG TTTTGCGGAT AAGGATTTTT CTGCACGTTC CCCGGTTACT
TCCGCTGATG AGGTGGGTGA ACTAAGTAAT AATTTTAACC GCATGGCGGA TATCATCCAG
GAATATAATG TCGGACTGGA GAGAAAGGTT GAAGAGAGAA CGGCTGCTAT CAGGAATCTT
TTAGACAATG CCGGTCAGGG TTTCCTCTCA TTTGGCTCTG ATTTGCAGAT TAATCAAGAG
TATAGTTCGG AATGTAAACG GATATTCGGT TTTGACATAG CGGGGCAGTA TTTCCCCAGG
GTAATATTTC CCGGTGATGA AGCCGAAAAA CAATTTTTAG AGAATGCTCT TCAAACCATA
TTTGGGGAAG AAGATGAATA CCGCAGGGGT GTTTACCTTT CCCTTTTGCC GGAAGAGCTC
ATGATAAATG GCCGCCATAT TCAGCTGGAG TATAAAGTTA TAGCTAATCG GCGCCTAAAA
GATAATTACA GTATTATGCT AATTATTACT GATATTACGG AAAAACGCTG CCTGGAGAAG
CAGATGGAGG AGGAAAGAGA GCTACTGGAA ATGGTGGTAA AAGTAGTAGC CAATAGAGAT
GATTTTCTGG AATACCGAAA CGATTTTCAA CGCTTTTGTA TCCATGGCAT AGGGGAATTG
CTGGATAGTG ACCTTCCCCG GGATGAAGTA ATAGCAGAAA TTTATCGGCA GATACATACT
TTCAAAGGTG GATTTGCCCA GATGAAAATG GGTTATCTCT TTAATCAACT ACATGATTGC
GAATCAGAAA TATCTGCCAG CCGCGATGAA TTGCGGGAGA TGTCAGCAGT AGAAATAAAG
GATTTTCTCG ATTCGTTTAA ACTATTCGAG GCAATGGCCA GGGATATATC TTTACTGGAA
GAGGTACTGG GTGAGGAATT CCTGGAACAT GATAATAAAT TGCTAATTGA TGAGCAAAAG
CTGCTGGAGA TAAAACAAAA GATAATCACT TGCCTGGCTC CCTGGGAGTG CAAAATGTTA
TTGCCCTATA TTAAGCGCTT GAGATTCAGG CCTTTTAAGG AGTTGTTGCG TTCCTATCCG
GAAAGCGTGT CCAGCCTGGC TGAATCGCTG GGGAAAAGTC TTCTACCGCT GAGAATAACT
GGCGGAGATA TGCTGGTAGA TAGCGATTAT TATCATGATT TTTGTAAAAG CCTGCTGCAT
GTTTTCCGCA ATGCCATAGA CCATGGTTTG GAGTCTCCTG AAGATAGGCT GGAGCTGGGC
AAAAATGAAT ATGGAATTAT CTCGTGTGAT ATTAAAGAAG AAGATGGCGG TATTGCAGTA
GTTATATCTG ATGATGGGCG AGGCATAGAT ATAAATTTAT TAAAAGAACA GGCTTTGGAT
AGGGGCATCT ATGACGAAGA ATATATAGAA GGTTTATCTT GTGAAGAGGC ACTGCAGTTG
ATATTTGCAG ATAGCCTTTC CTCTAAAGAA GAGGTTAGCA GTATTTCCGG CAGGGGTATG
GGAATGCCAG CAGTGAAGGC CGAATTAGAT AAACTAGGAG GAAAAGTAGA AATCAGCAGC
GAAAAAGATC GGGGTACAAG ATTTTGTTTT TGGCTTCCCG CTCATGATAA GATAGATATA
GAAGATTTTT CTATTGAAGA AATAATTAAT CCCCTGCTGG AAACCGCCCG GGAATTTTTT
TCCCGGGAGA TTGGAATTAA CTTATTGCAT TCTACCGAGG TGGAAAGGAA AAAGCGGCAG
GAATTGCTCC GGATTACTGC TTTTATTACT ATTAAAGGGG TTGTCCGAAG TTATTTTATC
CTGAGTGTGG ATGAAGAACT AGGGCGGTAT TTGGTGCAGG CGATGACTAT GGATGAAATC
GAGAGTGGGA CGGAAGAGGA TTTCGTTGAA GATGTTCTGG CTGAATGTGC GAACATGATA
CTGGGCAATT CCATCAAGCT TTTCCCTGGC ATAAGTGAAC TGGTAATGCT GGAAGTGCCG
GTTACCTTGT ACTCCGACCA GACGGCTATC AAGCACCTGC AGGCTGATAT ATGGACCTGC
GATTTCCTGT TCGAAGAGGG TAGACTTAGA TTGGGCCTTA TATCCCAAGA AGAAATATAT
TCTTGCCTAT AA
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| Protein sequence | MRNSLKSRFI IVVFTVCFCC LLVVSLVSYY NSYILVREET NQVAHEAVNR YASELNNWFM
QQAGVLHAIS QDIEINRDFS DEYLSLYLME KFQRRDSCVI DYYIGFADSN RKMVCATGWV
PPEDYEASTR EWYKEAVKNN KLVYITPYLD ADTKEMVITL ADPIRDGDRL LGVLAADILL
TDVMKLAQDV HIDKEHYSFL LDDCYNFIVH PHPDFQPLAS ESRNASQVMQ GLYRPLTEQI
QEGRYPIIEL KDYDNSKRCF ALSEIKETGW TFGIAIPHSE YFGPLKKLWY GFALALAISL
FIGFIIILPV VRSLLRPIED LHQAVGRFAD KDFSARSPVT SADEVGELSN NFNRMADIIQ
EYNVGLERKV EERTAAIRNL LDNAGQGFLS FGSDLQINQE YSSECKRIFG FDIAGQYFPR
VIFPGDEAEK QFLENALQTI FGEEDEYRRG VYLSLLPEEL MINGRHIQLE YKVIANRRLK
DNYSIMLIIT DITEKRCLEK QMEEERELLE MVVKVVANRD DFLEYRNDFQ RFCIHGIGEL
LDSDLPRDEV IAEIYRQIHT FKGGFAQMKM GYLFNQLHDC ESEISASRDE LREMSAVEIK
DFLDSFKLFE AMARDISLLE EVLGEEFLEH DNKLLIDEQK LLEIKQKIIT CLAPWECKML
LPYIKRLRFR PFKELLRSYP ESVSSLAESL GKSLLPLRIT GGDMLVDSDY YHDFCKSLLH
VFRNAIDHGL ESPEDRLELG KNEYGIISCD IKEEDGGIAV VISDDGRGID INLLKEQALD
RGIYDEEYIE GLSCEEALQL IFADSLSSKE EVSSISGRGM GMPAVKAELD KLGGKVEISS
EKDRGTRFCF WLPAHDKIDI EDFSIEEIIN PLLETAREFF SREIGINLLH STEVERKKRQ
ELLRITAFIT IKGVVRSYFI LSVDEELGRY LVQAMTMDEI ESGTEEDFVE DVLAECANMI
LGNSIKLFPG ISELVMLEVP VTLYSDQTAI KHLQADIWTC DFLFEEGRLR LGLISQEEIY
SCL
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