Gene Swol_0330 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwol_0330 
Symbol 
ID4281544 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophomonas wolfei subsp. wolfei str. Goettingen 
KingdomBacteria 
Replicon accessionNC_008346 
Strand- 
Start bp395584 
End bp396075 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content49% 
IMG OID638137216 
Producttripartite ATP-independent periplasmic transporters, DctQ component, putative 
Protein accessionYP_753042 
Protein GI114565888 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG4665] TRAP-type mannitol/chloroaromatic compound transport system, small permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones2 
Plasmid unclonability p-value0.0000018584 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCAAAA AATATAACGG TTTTGTAGCA GGTTTGAGCC AGTTTTTAGA TCAGATTGCT 
GGATTAAGCC TGGTAGCAGT AATGCTGGTA GTGGTGGGTA ACGTATTAAT GCGGGCGCTA 
TTTAAGCACC CCATTCTGGG AACCTATGAT TATGTCGGCT TTCTAACGGC AACAGCCATT 
GGACTGGCCC TGGCCCATTG TGCTCTGCAA AATGCTCACA TAGCCGTTGA TTTTGTAGTA 
GAGCGCCTCC CCCGTAAAAC TCGTGCGCTC ATTGATACTG CCACCAATTC GGTAGCTATA 
ACTTTTTGGG GTTTTGCCTT ATGGAACCTG GCTATTTACG CGGGAACCAT GAAAGCCAAC 
GGCATTGTCG CCGCCACCAG CCAGTTGCCG GTGTCGCCCT TCATATACCT GGTGGCCTTT 
GGTCTTTTCA GCCTTTGCCT GGTTTTGCTA AGCCATCTGG GTGAGTCTTT GAGAAGGGTA 
GCAGCAAGAT GA
 
Protein sequence
MAKKYNGFVA GLSQFLDQIA GLSLVAVMLV VVGNVLMRAL FKHPILGTYD YVGFLTATAI 
GLALAHCALQ NAHIAVDFVV ERLPRKTRAL IDTATNSVAI TFWGFALWNL AIYAGTMKAN 
GIVAATSQLP VSPFIYLVAF GLFSLCLVLL SHLGESLRRV AAR