| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swol_0197 |
|---|
| Symbol | |
|---|
| ID | 4281653 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008346 |
|---|
| Strand | + |
|---|
| Start bp | 241052 |
|---|
| End bp | 243733 |
|---|
| Gene Length | 2682 bp |
|---|
| Protein Length | 893 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 638137094 |
|---|
| Product | flagellar capping protein-like protein |
|---|
| Protein accession | YP_752920 |
|---|
| Protein GI | 114565766 |
|---|
| COG category | [N] Cell motility |
|---|
| COG ID | [COG1345] Flagellar capping protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCATCTT TACGCATTGG CGGCATAGCC AGCGGACTGG ATACGGAAAA CATAATAAAA
GAAATGTTAA AAGCACAGCG CAGCAAGATA GAGCGTAAAG TGCAGGAAAA AACCATCCTG
GAATGGAAAC GGGATGATTT CCGAACAGTC AATACCAAGT TATTGGCCCT GCGCACCGCC
ACCTTTGACC TTAAACTCGG TGATACCTTC AACGCCAAGA AAGCCGCCAG TTCCAACGAA
AGCATATTGA CCGCCACGGC CAAGAGTACG GCCACCCCCG GCACCTATGA TGTCAGGGTA
AAACAGGTGG CGCAGAAAGC CACCCTGACC AGCCAGCAGT CCCTGGGCTC CAAGGAGAAT
GTCTCCAGCG TGGCCGCCCA GTTCGGCATT GAGGAAAATA CCCAAATAGA CTTTACCCTG
GCCGGCAAAA ATGGGGAGAT CCCCTTTTCC TTTACGGCGG GAGCAACCAG CCTGGCGGAT
ATCGTACGAA TTATTAATGA TGAGGATATG GGTATCAGAG CCTATTATGA TGCCAATGTG
GATAGAGTGT TTCTCATGAG CACTGAATTC GGTGAAAATG CCGCTATAAA AGTGAAGATG
GACGGTATGC GGGATAGCGG GGGCAATCTT CTGGTAAATG GAGAGGGGAA GGCCTTGAGC
TTCCTGGGGG ACTATCTCAA ATTGAACATA GATATGAAGA GTTTAAACGA AACGGCCCCG
GCCAGCGGCC GGAAAATCAC CAGTAACAGT GCTTTGATTA TTCATGACCC AGCTGCTATT
ACCTTAAGCC AGATGTATGA AGGCGGAACC GCTCCTGCCA GTGTAAGCTT TACCCTTAAG
GGCGAAAAAG ACAGCAAGGA TTTCACCTTC GACACCGCGA TAAGTCTGCA AGAAATGATA
AACCAGATCA ACAATGAGCG GCTGACTACT GGTTTGACCG CCAGTTATGA CAGCAGCAGC
GGTAAAGTGA TCTTTTCCAG CGGGGGGCAG GTTACCATCA GCGGGGACAC AGACAACTTC
CTGCGGGATA AGCTTAACAT GACCATCGGC AGCCAGCAGG GAACCTTGAG CAGCAACACG
GCGGTGCGGG TATATGATGC GGCCAATATT AAGCTGAACT CGCTCTACAC TTGCGAAGAC
CTGCAGTTTA CCCTGGAAGG AGGTCTGGGT AGCCATAAAT TTTCCTTTAA TGCCAGTTCC
ATCAGTGCGA CTACCGTGCA GGATATGATA GACAGTATTA ACCTGTGGAG GAATACTACC
GGTATAACGG CCTCCTATGA TGGTGCTTCC GGGAAAATCA GCCTCTGGGA TAGTTGTCCC
CTGGCAGCCC TGGAAGCAGG CAGTACAGCC ACCAATGCTA CCCTGGATTT TAATGAAGCA
TTATACTCCA GTTCAGATGG AACTCCGAGC GGAACCTTGA GCGCATTGGC TAATGGCCAG
GACCTTACTG CCAGTTTTAT TTATACCGGT TCCGGCTCCC TGACTTCCGC CACCTACAAG
AGTGACGGCA GCATAGACTT TGTGGCAGCA GGAGCGGCCG ATGGCGACAC CATTGTACTT
AACGGAGGGG GGTTAGACAA TCTTTTTGAT GCTGAAGGCA ACCAGTACCT CCCGGTAAGC
ATGACTTATG ATGGAACTGC CGGAACCTGG AAATATACTA GCCGCAGCAA TGATGAGCGC
ATGATAGCTA TTCGCTATGA CAACGAAGGT TTCCTGGCCG ATGAACTGAA TATTAATATG
TACGAGATGA AGGGAAGCAA AGCCATCATT GATTTCAATG ATGCTCAAAA CCTAGAGTTT
GATACCAACG AGATTACCTT AATGGACAGC ATCAACCTAA ACCTGCAGGC GGCTAACCCC
AGCCAGACCG TACGGATTAC GGTTACCAAC GATATTGATG GAGCAATAGA AAAGATTGAG
GCTTTTGTTG AAGCCTATAA CACGGCTATT GTTTATATGA ATACAGAACT AACGGAGAGA
CGCTATAATG CCCGGGATAA ATACGGAGGC AGTTTTCCCC CGCTTACCGC CGAGCAGAGA
AAGGATATGA GCGAGGACGA AATCAAGGCC TGGGAGGAAA AGGCCAAAAG CGGTATGCTC
AGGGGCGATT CCATTTTGTT CACCGCCTAT TCCAGCACCC GCTGCGCGGC CACCGATCCG
GTGCAGGGGC TGGCCAGTAC CAATACTTAC AAAAGCCTAG CCTCTATCGG AATCAGCACC
CCTACCTTTG TGCGCGGCTC GATAGAGGGA GGAAAGTTGG AGATTGATGA AGATAAGCTT
CGGGCCGCTC TGGAGGCCGA TCCGGACAAG GTTATGGAGC TTTTCACCCT GGATAAAGTG
ATTACCAATG AGGAAGGCAA AGAAATATTG GACTGGAACG GCAATCCCCT GCGCAACCGG
GGTATAGCTA TCCGCCTCTA TGAGGCGGTT AATGAAAATA TCACTACCAT AACGGAAAAA
GCCGGGTTAC CTTCCGCCAA AATAGATAAT AGCCTACTGA CAAAGGAAAT AGGGAGAATA
GATGATCGTA TCAAAAGCTA TGAAGAGCGC ATGCAGGAAA TGAGTGAACG CTACTGGAAG
CAGTTTGCTG CCATGGAGAA AATGGTGAAC TACTATAATT CCATGAGCAA CTGGCTTTCC
CAGCAGGTAG CGCAGATGGC GGGACAGAAT CAGCAACAGT AG
|
|---|
| Protein sequence | MSSLRIGGIA SGLDTENIIK EMLKAQRSKI ERKVQEKTIL EWKRDDFRTV NTKLLALRTA
TFDLKLGDTF NAKKAASSNE SILTATAKST ATPGTYDVRV KQVAQKATLT SQQSLGSKEN
VSSVAAQFGI EENTQIDFTL AGKNGEIPFS FTAGATSLAD IVRIINDEDM GIRAYYDANV
DRVFLMSTEF GENAAIKVKM DGMRDSGGNL LVNGEGKALS FLGDYLKLNI DMKSLNETAP
ASGRKITSNS ALIIHDPAAI TLSQMYEGGT APASVSFTLK GEKDSKDFTF DTAISLQEMI
NQINNERLTT GLTASYDSSS GKVIFSSGGQ VTISGDTDNF LRDKLNMTIG SQQGTLSSNT
AVRVYDAANI KLNSLYTCED LQFTLEGGLG SHKFSFNASS ISATTVQDMI DSINLWRNTT
GITASYDGAS GKISLWDSCP LAALEAGSTA TNATLDFNEA LYSSSDGTPS GTLSALANGQ
DLTASFIYTG SGSLTSATYK SDGSIDFVAA GAADGDTIVL NGGGLDNLFD AEGNQYLPVS
MTYDGTAGTW KYTSRSNDER MIAIRYDNEG FLADELNINM YEMKGSKAII DFNDAQNLEF
DTNEITLMDS INLNLQAANP SQTVRITVTN DIDGAIEKIE AFVEAYNTAI VYMNTELTER
RYNARDKYGG SFPPLTAEQR KDMSEDEIKA WEEKAKSGML RGDSILFTAY SSTRCAATDP
VQGLASTNTY KSLASIGIST PTFVRGSIEG GKLEIDEDKL RAALEADPDK VMELFTLDKV
ITNEEGKEIL DWNGNPLRNR GIAIRLYEAV NENITTITEK AGLPSAKIDN SLLTKEIGRI
DDRIKSYEER MQEMSERYWK QFAAMEKMVN YYNSMSNWLS QQVAQMAGQN QQQ
|
|---|
| |