Gene Swol_0177 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwol_0177 
Symbol 
ID4281326 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophomonas wolfei subsp. wolfei str. Goettingen 
KingdomBacteria 
Replicon accessionNC_008346 
Strand+ 
Start bp219971 
End bp220543 
Gene Length573 bp 
Protein Length190 aa 
Translation table11 
GC content48% 
IMG OID638137074 
ProductTetR family transcriptional regulator 
Protein accessionYP_752900 
Protein GI114565746 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAG GTAAAAGAGA GTTGATTCTG GAGGCGGCGG TACATGTCTT TTCCTCCAAG 
GGTTACCATA ATGCCCGTAT GGAGGAGATT ACTGCCGTGG CGGGGATAGG GAAGGGAACC 
ATATATGAAT ATTTCCCCAG CAAGCTGCAG CTATTTCAGG ATATGCTCAA TAAAAGCCTG 
CAGGTCTACT ACCAAAATTT CAACCCGGAA GAGATGAAGC AATTACCCGT AGAGCAAAGG 
CTTCGTATCA TTTTTGAGAC CCACATTAAA TTTTGTCGGG ATAATAAAGA ACTGACCCGC 
CTGGTATTTT GGGATAGTGA TGTTTTTGAC CAGGAACTGA GGGAATGGAT CTACACTCAG 
CGCCAGGAAA AAGAAGAGCG GGTGGTGGAA ATCATAGAAG AGGGAATGGC CCGGGGAGAG 
CTGCGCGAGC TTGACCCCAT GCTGGTGAAG GTATTATTAA CCGGCTCCGT AGCAGCTATG 
TGGGCTCCCA TCACCCTGGA CGGCTGGGAA ATTGCACCAG AGGTGCTGGC CCGCGATGTT 
ACCGACATAC TCATGAACGG CTTAAAGAAA TAA
 
Protein sequence
MKKGKRELIL EAAVHVFSSK GYHNARMEEI TAVAGIGKGT IYEYFPSKLQ LFQDMLNKSL 
QVYYQNFNPE EMKQLPVEQR LRIIFETHIK FCRDNKELTR LVFWDSDVFD QELREWIYTQ 
RQEKEERVVE IIEEGMARGE LRELDPMLVK VLLTGSVAAM WAPITLDGWE IAPEVLARDV 
TDILMNGLKK