| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_4003 |
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| Symbol | |
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| ID | 4280894 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 4771082 |
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| End bp | 4772101 |
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| Gene Length | 1020 bp |
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| Protein Length | 339 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638136824 |
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| Product | bile acid:sodium symporter |
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| Protein accession | YP_752667 |
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| Protein GI | 114565153 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0798] Arsenite efflux pump ACR3 and related permeases |
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| TIGRFAM ID | [TIGR00832] arsenical-resistance protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.656396 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGAATAT TCGAACGGTT TCTATCGGTA TGGGTTGGCT TAAGTATGTT GGCTGGGGTG
TTGTTAGGTT TATGGCAACC CGGAGTATTT CAAGTTATTG CCAACCTTGA AATCGCCCAC
GTTAACTTGG TGGTTGCGGT GTTTATTTGG GTGATGATTT ACCCAATGAT GGTGCAAATT
GATTTTTCTT CCATAAAAGA TGTTGGCCGA AATCCCAAAG GATTATTGCT TACAGTAGTC
ATTAATTGGT TAATTAAACC CTTCACCATG GCAGCTTTAG GTTGGTTGTT CTTTAAGGTG
CTATTTGCCG ACTTGGTCGA TCCTGCATCT GCACAAGAGT ATATCGCAGG CATGATTTTA
CTTGGCGTGG CCCCTTGTAC CGCGATGGTG TTTGTGTGGT CGCAATTAAC CAAAGGGGAT
GCGAACTACA CCTTAGTGCA AGTGTCGGTT AATGATGTGA TTATGATTTT TGCCTTTGCG
CCCATTACCG CTTTTTTGTT GGGGGTGAGC GATATTCAGG TGCCATGGGA AACCTTGCTT
ATTTCGGTAT TACTGTATGT GCTGTTGCCT CTAATTGCTG GAGTGACAAC GCGTTACTTA
CTTAATCGCC GCCATGGATT GGTTGCTATT AATTCCTTTC TGGCTAACGT AAAGCCTTGG
TCAATTATTG GTTTATTGGC CACTGTGGTA TTGCTATTTG GATTTCAGGC CGAGGTAATA
GTGTCGGATC CACAAACGAT AGGCTTAATT GCTGTGCCGT TGATTATCCA AACTTACGGC
ATTTTTATCA TCGCTTATAT CGCGGCCAAA TGGTTAAAAC TGGCGCACAA TATTGCTGCG
CCAGCTTGTT TAATTGGCAC CTCTAACTTT TTTGAACTGG CAGTAGCCGT GGCGATATCG
CTTTTTGGTT TACATTCAGG TGCAGCCCTC GCCACAGTAG TGGGAGTGTT GGTTGAAGTG
CCGGTGATGT TGTCGCTGGT GGCGATTGTT AACCGCACAC AGCATTGGTT TAAGCATTAA
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| Protein sequence | MGIFERFLSV WVGLSMLAGV LLGLWQPGVF QVIANLEIAH VNLVVAVFIW VMIYPMMVQI
DFSSIKDVGR NPKGLLLTVV INWLIKPFTM AALGWLFFKV LFADLVDPAS AQEYIAGMIL
LGVAPCTAMV FVWSQLTKGD ANYTLVQVSV NDVIMIFAFA PITAFLLGVS DIQVPWETLL
ISVLLYVLLP LIAGVTTRYL LNRRHGLVAI NSFLANVKPW SIIGLLATVV LLFGFQAEVI
VSDPQTIGLI AVPLIIQTYG IFIIAYIAAK WLKLAHNIAA PACLIGTSNF FELAVAVAIS
LFGLHSGAAL ATVVGVLVEV PVMLSLVAIV NRTQHWFKH
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