| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_3928 |
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| Symbol | |
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| ID | 4280819 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 4688380 |
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| End bp | 4689381 |
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| Gene Length | 1002 bp |
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| Protein Length | 333 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 638136749 |
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| Product | ADP-heptose--lipooligosaccharide heptosyltransferase III |
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| Protein accession | YP_752592 |
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| Protein GI | 114565078 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0859] ADP-heptose:LPS heptosyltransferase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAAA TCTTAGTCAT CAAACACGAT AAAATTGGCG ATTTTGTACT GACATGGCCA
GCACTTTACT TACTCAGAAA AGCAATGCCC GAAGCGACTA TTGATGTATT TGTCGCACCG
GTTGTTAAGT CCTTTGCTGA AGCCTGTCCA TATGTAGACA ACACTATTAT CGACTCAAAA
GATGATGCAG ACATTGCTGA GCAAATTACG AAGCAAAATT ACGATGCAGT GATCGTGCTG
TTATCAGAAT TTCGAATTTA TAAAATCCTT AGCAAAAGCA ATATTCCATA TAAATTAGTA
CCTAAACATA ATTGGTATCA ATATTTATAT AAACATCGGG CAAGCAATGA ATACTTAAAC
AGTGAAGGTT GCTGGCGAGG TGCATGTATG CTGGTAGAGC ACTTCTTAAC TCATCACGGT
TATGCCATCC CTAAACTACC TGATAGATTT TGGGATATGA GTGATCGCAA AGAATATTGG
CAACAACACT ACCAAAAGTT AACCAACGAA AAGCTAATTT TTATTCATCC AGGTACCGGC
GGCTCTTCTG GTTGCGTACC TGTAGAAAAG TTAGTTCAGT TAATGATAAA TGTTGATAAA
CTGACTCAAT CACCATGTCA TTTTATTTTA ACATTTAACG GAAGTGAACT GGAGCTAGCA
AAAGAAATTC AAACTTTGCT GGCCAATACC TCAATTAAAA TATCGCTGGC TAAGCCGTTA
GACCGTTTGA TTGATTTTTC CGAATCATTG GTTGCAGCAG ACATGTTTAT TGCAGGTTCA
ACAGGGCCTC TGCATATCGC GGGCTTACAT AATGTGCCTA CTGTTGGATT TTACGCAGGA
AGACGCTCAA CACCCCATAT TAGATGGGGA ACATTATCTG AACCAAGCAA ACGATTTGCT
TATACGCCTC CAGTAGGAAA AAGAACGGGT CGTAATATGG CGTTAATCAA TTTTGATCAG
GTATCGAATG AAATAACCGA CTTTTTGAAC AAACAATCTT AG
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| Protein sequence | MKKILVIKHD KIGDFVLTWP ALYLLRKAMP EATIDVFVAP VVKSFAEACP YVDNTIIDSK
DDADIAEQIT KQNYDAVIVL LSEFRIYKIL SKSNIPYKLV PKHNWYQYLY KHRASNEYLN
SEGCWRGACM LVEHFLTHHG YAIPKLPDRF WDMSDRKEYW QQHYQKLTNE KLIFIHPGTG
GSSGCVPVEK LVQLMINVDK LTQSPCHFIL TFNGSELELA KEIQTLLANT SIKISLAKPL
DRLIDFSESL VAADMFIAGS TGPLHIAGLH NVPTVGFYAG RRSTPHIRWG TLSEPSKRFA
YTPPVGKRTG RNMALINFDQ VSNEITDFLN KQS
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