Gene Sfri_3865 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_3865 
Symbol 
ID4280756 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand+ 
Start bp4618037 
End bp4618654 
Gene Length618 bp 
Protein Length205 aa 
Translation table11 
GC content42% 
IMG OID638136686 
Producttranscriptional regulator, TetR family protein 
Protein accessionYP_752529 
Protein GI114565015 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACCAA TGAACACAGA AAAGCAAACA CGCAGCCAGA TTAAACGTGC CGCGATTATT 
GAAGCAGCCA GAACAACCTT TAAAGAATTA GGGGTTGCGG CAACCAGTAT GGATAAATTA 
GCCGAAGTAG CTGGAGTGTC TAAGCGCACG GTATACAACC ACTTTGCCAC CAAAGAAGCT 
TTGGTGATGA CCTTGATGAC TGATTTATGG CAACAAGCAT TATCTCAACC CTCTGTGATA 
TATAGCTCAC ATCAACCTTT GGCAGAACAA CTGCAACAGT TGGTGCGTTT TGATATGGAT 
TACATTCAAT CAGAAGAGCA CATTGAAGTA TCACGAATGG TGATTGGCCA TCTGTTTTAT 
ACCACTGAAA TGCAGGAAGA ATTGCAAAAG GTTATTAAAG AAGAAACGGC TATTTTGCGC 
TGGATAAAAG CAGCGACACT GGACGGACGC TTAACTGTGA CGAATGTTGA ACAGGCCCAA 
GGAGAAGTAC AAAGCTTGAT TAAAGGCCAA TGTTTTTGGC CATTAATATT TCAAGTCGAA 
GAGCCATTAA ACGATCAACA AAAAGATGAC ATTGCCGCCA GCATAGTAAC CATGTTTTTA 
TGCCGTTATC AGGCATAA
 
Protein sequence
MKPMNTEKQT RSQIKRAAII EAARTTFKEL GVAATSMDKL AEVAGVSKRT VYNHFATKEA 
LVMTLMTDLW QQALSQPSVI YSSHQPLAEQ LQQLVRFDMD YIQSEEHIEV SRMVIGHLFY 
TTEMQEELQK VIKEETAILR WIKAATLDGR LTVTNVEQAQ GEVQSLIKGQ CFWPLIFQVE 
EPLNDQQKDD IAASIVTMFL CRYQA