| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_3853 |
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| Symbol | |
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| ID | 4280744 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 4602762 |
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| End bp | 4603550 |
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| Gene Length | 789 bp |
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| Protein Length | 262 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 638136674 |
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| Product | transcriptional regulator, AraC family protein |
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| Protein accession | YP_752517 |
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| Protein GI | 114565003 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 43 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTTTGATG CAATTGGTTG GGATGAAATC AAAAATTTTG AGTATATGAA GCAATCCATT
ATTGCCAAAA TAGAGCATGC CTGTGCCAGC CACGAAATTC CGCTGCATAC TCACCCAAAA
GGTCAGTTAA TCTTAGCATT GCATGGTTAT GTGACTTGCG AGGTATCGGC AAAAATGTGG
ATGGTACCAA CCCATAGCGC TATTTGGATC CCTGCGTACA AAGTCCACAG TAACCGCGCA
TCAGATAACG CCAAGTTGTG CCATTTATTT ATCGATAGCA ATATGGACGG CATGCCACAA
AATACTTGTA CATTAGCTAT TTCGCCATTA GTGAAAGAGC TGATGTGTGA ACTTGCTAGT
CGCGATCAAC ATTATCGCTC AAACAGTAAA ACGGCACGAT TAGCTCAGGT ATTACACGAC
CAATTAATTG ATATGCCGAT CCAGCATTTA GATTTTGTTC TGTCTAAAAA CATGGTTATT
CAAGCGATGA GCCAGCAATT GATAAGTCAG CCTCACGACA GAAAAACACT GCCGCAATGG
GCTGAACAAT TTGCCTTAAC AGAGCGCACA TTAGCGCGGT TGATTAAGAA AGAAACCGGA
ATGACTTTTG GCAAATGGCG TACACAGTTG CATATTATTA CGTCACTGCA AGCACTGTCA
GATAAGCAAA GTGTGCAACA AGTATCAGAG TTATTAGGCT ATGAGTCGGT AAGTGCGTTT
ATTACCATGT TTAAAAAAGT CATGAAAACA TCACCGATGA AATACATGAA CGAGTTAAAT
GCATACTGA
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| Protein sequence | MFDAIGWDEI KNFEYMKQSI IAKIEHACAS HEIPLHTHPK GQLILALHGY VTCEVSAKMW
MVPTHSAIWI PAYKVHSNRA SDNAKLCHLF IDSNMDGMPQ NTCTLAISPL VKELMCELAS
RDQHYRSNSK TARLAQVLHD QLIDMPIQHL DFVLSKNMVI QAMSQQLISQ PHDRKTLPQW
AEQFALTERT LARLIKKETG MTFGKWRTQL HIITSLQALS DKQSVQQVSE LLGYESVSAF
ITMFKKVMKT SPMKYMNELN AY
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