| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_3842 |
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| Symbol | |
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| ID | 4280733 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 4584098 |
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| End bp | 4587283 |
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| Gene Length | 3186 bp |
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| Protein Length | 1061 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 638136663 |
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| Product | type III restriction enzyme, res subunit |
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| Protein accession | YP_752506 |
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| Protein GI | 114564992 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG1061] DNA or RNA helicases of superfamily II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTTTTCAC TTTCAAAAGG CCTATCTGAC ATGGAACAAG TTGGTATTTA TGAAAAGCTT
ATTACTCAAC TAATAGATAA AAGCATCAAT CGTGATGTGT TCTATTTAGG TGAGCGGCCA
TTAGAAAGCG CTGAGGCCAG TGTTTGGCTA TCGAGATTTT TGACCAAGAT AATGGAGAGT
GCCATTGGTG CAATTCCCAG TGGCGATAAT CAACTTACAG AGCAAATCGG CTTAGCAAAT
AAGTTGGTGC TGTGGTTGAA AGATCATGTT CAAGATGATC AATTGATCAC TGAAAATTTA
CTCGATAGTA AAGGCCGTAT ATTAACGGCA CTATTTGATA AAACAAATCC TATAGCGACA
GACTTTCCAG CGTTTACTAA GGCTATTTAC CCGTTAACAG GGTTAAGTCA AAGTGAACTT
TTTTGTGGCA GCAATGCCGG AATTTCTTTG GACACAGAGT TAAAGCGCGA GATCCGTTCA
GCGGATAAAA TTTATTGGTT AGTGTCTTTT ATTAAGTGGG CCGGCATTCG AATTTTCAAG
AATGAACTTG AAGAGTTTAC TCGAAGTGGA AAAATCCTGC GGATCATCAC GACATCTTAT
ATGGGTGCGA CAGATGCTAA AGCGGTCGAT TTTTTAGCGA GCTTACCTAA CACCGAAGTT
AAATTGAGTT ACAACACCAA GCGCGAGCGC CTGCATGCGA AATCTTATTT ATTTTTGCGC
AATACAGGAT TTCATACTGG ATACATAGGT TCATCGAATT TGTCCCATTC TGCGCTAACC
AGTGGCCTTG AATGGAATTT AAAAATAACC AGCCAAGAAA TCCCCCACAT CATAGATAAA
TCCCTCAACA CCTTTGAATC ATATTGGCAA TCCAGTGAAT TTGAATTATT TAAGGGCGAT
ATTGAATCTA AAAACAAACT TCACGAGGCG TTGCGGGAAG CTAAGGGCGG TTACAGTGAC
GACAGTGCAT TTCATTTTGA TATAAAACCC TTTGCACATC AGCGAGAAAT CCTTGAGCAG
CTGGATGTTG AGCGCACAGT TCATCAGCGC TATAAAAATC TAGTGGTTGC GGCAACGGGC
ACAGGTAAAA CACTTATTTC AGCGTTTGAT TTTGCCCGTT TTTATAAACA GCACCCAGAA
GCCAACTTTT TATTCGTGGC TCATAGACAA GAAATTCTTA AGCAAGCTCT GTCTGCATAC
CGTGGTGTAT TGAAAAATAA TCAGTTTGGT GAATTGTGGG TTGCTGAGCA TAAACCTAAT
AGCTACCGGC ATTTGTTTGC TTCAATACAA AGCTTAAATT TGCAATTATC AAGCTTACCG
CTCACCGCTG ATTTTTATGA TTATATTGTG ATCGATGAAG TACATCACAT TGCAGCCAGT
AGTTATCGAG GATTACTAGC GCATTTCTCA CCCAAGATTT TATTGGGGTT AACCGCCACG
CCAGAGCGTC ATGATGGGCA AAACATTCTG GATGACTTTT GTGGGGTAAT AGCTGCAGAA
ATTCGTTTGC CCGAAGCAAT CAATCAGCGC TATTTATGTC CTTTCCAATA CTTTGCTATT
GATGATGATA CCGACCTTCG CAAAATTAAA TGGCATCAAG GGCGATATGA TATTGCAGAG
CTAAGTCATT TATATACTCA TAATGAACAG AGAGTTGTGC GCATTATTAG CAGCCTGAAT
GATACAGTCA CTGACATTCA TCAAATAAAA GCTTTGGCGT TTTGTGTCAG CAAAGAACAT
GCAGAATACA TGGCAAAGAA GTTTAACTTA GCCGGTATTA GTGCGGATGT ACTCACCAGT
GATAATAGTC ACGAGAGGCA ACAAAAACGA CAGAGTTTAA TTAGCGGTCA TGTGAACATT
TTATGCGTGG TGGATATTTT TAATGAAGGT GTCGATATTC CAGACGTTGA TACATTATTG
TTTTTACGTC CAACCGAAAG CTTAACGATC TTTTTGCAGC AGCTAGGACG AGGATTGCGT
CTAACCGATG ATAAACAGTG CTGTACAGTA TTGGATTTTG TGGGTAATTC TCGTGATGAA
TATGACTTTT CGCAAAAGTT TCGCGCGCTG GTTGGTAAAA CGAATCAATC GATTAAAGAT
GAGATAACCA ATGATTTTCC TCACTTGCCA TTAGGCTGTC GGATCGAGCT AGAAGAACAG
ACTCAGGCAA TGATTTTACG AAATATTAGC CGTGCAACCA TGAATGCTAG CAGGCTGCGA
CAGCTCATTA ACAATTTTGG GCACCAAAGT ACGCTTACCT TAAGCTTGGT TAATTTTTTA
CGCTTTAATC CAAATGTTAA TTTAGAAGAC ATTTATAAGC TAAAAATGAG TTGGTTAGAA
TTGGTTGGTA GTGCAAATAA CAATCAAATT AATGAACAAA ATTTAAACGT AATTCTAGCT
AAAGCCTACT ATCGTGCGAT AAATTATCAT TTGCTCGGCT GCAATTCCAT TTCATATTTG
CAGTTTTTAA AGCAGCTAAT TATCGATAAC TTCAGTTTCG ATGATATGGA TGCGACCCAG
TGCCAATTTG CATTAATGTG CCACTATAAT TTTTGGGATA AGTCAGGAAC CGAGCTAGGT
TTTACTAGCC TTAAGCAAAG TTTAGCTGCG TTGAGACATA CTCAATTACA AGCAGAACTG
CTTGATGTTA TATCGTTACT TATAGATCGA ATTCATCATA GCGAACTTGA AATGCATATC
CCCTCAATAC CTACCTTAAA AGTGCATTCA AGATATACTA GGGAACAAAT ACTCGCCGCC
AGTGGTGCAA GTTCTTTTGA CAGAAAATCA ACCGCAAGGG AAGGCGTTTT AGTCCTTAAC
GATCTTAACG TTGAATTACT GTTTGTGACC TTGAAAAAGT CAGTCAAACA ATTTTCACCA
ACCACCATGT TCCATGACTA CGCAATTAAT GAATCGCTAT TCCATTGGCA ATCTCAAAAT
AGTGCGAGAC CCGAATATGG CAAAGGTTTA AGCTATATCG AGCATGAAAA AATGGGCCGT
AAATTGATTT TGTTTGTGCG TGAACAAGCG AAAGATGAAA ACGGTCGCAC CATGGGTTTT
GTCAATTTTG GCGAAGCGGT TTACATAGAA CACTCTGGAG CGCAGCCTAT CAATATAACA
TGGAAGTTAA TGACTCCCAT GCCTGATGCT ATGTGGCATG AAGCTGCAAA ATTAGCCGTA
GGATAA
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| Protein sequence | MFSLSKGLSD MEQVGIYEKL ITQLIDKSIN RDVFYLGERP LESAEASVWL SRFLTKIMES
AIGAIPSGDN QLTEQIGLAN KLVLWLKDHV QDDQLITENL LDSKGRILTA LFDKTNPIAT
DFPAFTKAIY PLTGLSQSEL FCGSNAGISL DTELKREIRS ADKIYWLVSF IKWAGIRIFK
NELEEFTRSG KILRIITTSY MGATDAKAVD FLASLPNTEV KLSYNTKRER LHAKSYLFLR
NTGFHTGYIG SSNLSHSALT SGLEWNLKIT SQEIPHIIDK SLNTFESYWQ SSEFELFKGD
IESKNKLHEA LREAKGGYSD DSAFHFDIKP FAHQREILEQ LDVERTVHQR YKNLVVAATG
TGKTLISAFD FARFYKQHPE ANFLFVAHRQ EILKQALSAY RGVLKNNQFG ELWVAEHKPN
SYRHLFASIQ SLNLQLSSLP LTADFYDYIV IDEVHHIAAS SYRGLLAHFS PKILLGLTAT
PERHDGQNIL DDFCGVIAAE IRLPEAINQR YLCPFQYFAI DDDTDLRKIK WHQGRYDIAE
LSHLYTHNEQ RVVRIISSLN DTVTDIHQIK ALAFCVSKEH AEYMAKKFNL AGISADVLTS
DNSHERQQKR QSLISGHVNI LCVVDIFNEG VDIPDVDTLL FLRPTESLTI FLQQLGRGLR
LTDDKQCCTV LDFVGNSRDE YDFSQKFRAL VGKTNQSIKD EITNDFPHLP LGCRIELEEQ
TQAMILRNIS RATMNASRLR QLINNFGHQS TLTLSLVNFL RFNPNVNLED IYKLKMSWLE
LVGSANNNQI NEQNLNVILA KAYYRAINYH LLGCNSISYL QFLKQLIIDN FSFDDMDATQ
CQFALMCHYN FWDKSGTELG FTSLKQSLAA LRHTQLQAEL LDVISLLIDR IHHSELEMHI
PSIPTLKVHS RYTREQILAA SGASSFDRKS TAREGVLVLN DLNVELLFVT LKKSVKQFSP
TTMFHDYAIN ESLFHWQSQN SARPEYGKGL SYIEHEKMGR KLILFVREQA KDENGRTMGF
VNFGEAVYIE HSGAQPINIT WKLMTPMPDA MWHEAAKLAV G
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