| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_3759 |
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| Symbol | |
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| ID | 4280652 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 4467142 |
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| End bp | 4468377 |
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| Gene Length | 1236 bp |
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| Protein Length | 411 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 638136572 |
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| Product | hypothetical protein |
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| Protein accession | YP_752425 |
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| Protein GI | 114564911 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3170] Tfp pilus assembly protein FimV |
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| TIGRFAM ID | [TIGR03505] FimV N-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.57165 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAGCT TTAAGGTGCT AGCAGTATTA GCATTATTGG CCGTTGATAG TATTTCAACT
GCTATTGCAC AAGTCAGTCA TATCAGTATT GATACTATTC CATTTGAAAG TGGACAATCT
CCTCAGTTAA CCGTGAACAT TATAACCGAT CACCATGATT TATCGCGGCT GACATTTTAT
TTGCGCCAAA TTTATCAAGA TAATATTGTG TTAGAAAAGC TTGAAGTTGA ACAGCGTGAT
CGTGATGTAT TTGTATTAAG TGGTACCGAG AAAATACGCG ATCAAGATGC AGCACTCATT
GTTTCTGAAT ACCGTAATGC TAAATGGCTA CAATACTCAC CTGTACCTTT ATTTTCTCAA
GCCATTGTTC AGAGTCAATA CCAGCCTGTA GCCATTAAAA CCATGAAGTC AGCCTCGGCA
TTATCGACTT CTATGCCAAC AACAATAAGT CGCAAGGCCA TTGCTATACC TCAGGTAACT
ACAACGCAAA AAAATCTGAA TAATTGTCAG ATAAATCAGT TACCGAATGA TACTTTATGG
AAAATAGCGG TGCGCTACCG TAAACAATGG AATTCAAATA TTTATGGTGC AATGCTTGCG
CTTTATCAAA CGAATCCCTC TGCATTCTAT CAAGATAAAA TTAGTCTACT GCAATTAGGC
AGCTCGTTAC GTTGTCCATC AATGGCGACT CTTTTGCGCT ATCAAAATGT CGCTGTAGAT
AAGATAACAT TCGACAATTT AGTCGCCAGT CAACGCGGTA AGTCTCAAGT AGTACCAATG
CCTACTCTAA CAGTGCCAGC AACTGTTATC GCCACCCAGC CGGTATTGAG CAATGGTTCG
ATGAATGATA TGGACAGTAA AAAATCTGAA AGTAATGAGT TATTGGCGGC TATTCATGAA
ACGAAAATAT TGCCTCAGCC ATTGCCAATT AAGAACGTAG CCAAGCTATC TCTACCGACT
TATGGCCAAG ATAACATCTG CGTAATGGAT AAATTCCCTC AAGACACTTT ATGGCGAGTT
GCTGATCGTT ATTATCGACA ATGGCAAATC AGTGTCTATG GCGCAATACT AGCGATTTAT
GAGGCAAACC CAGATGCGTT TGCCAATGGT AAAATCTACT TATTGATGTC TGATAGCCGT
TTACAATGCC CATCAGGTGA GATGTTAAAG CAACATCAAA ATTCATCTAA GGCACAAATC
ACCTATGAAG CACTAGAGCG CACGCATCGC CAATAA
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| Protein sequence | MKSFKVLAVL ALLAVDSIST AIAQVSHISI DTIPFESGQS PQLTVNIITD HHDLSRLTFY
LRQIYQDNIV LEKLEVEQRD RDVFVLSGTE KIRDQDAALI VSEYRNAKWL QYSPVPLFSQ
AIVQSQYQPV AIKTMKSASA LSTSMPTTIS RKAIAIPQVT TTQKNLNNCQ INQLPNDTLW
KIAVRYRKQW NSNIYGAMLA LYQTNPSAFY QDKISLLQLG SSLRCPSMAT LLRYQNVAVD
KITFDNLVAS QRGKSQVVPM PTLTVPATVI ATQPVLSNGS MNDMDSKKSE SNELLAAIHE
TKILPQPLPI KNVAKLSLPT YGQDNICVMD KFPQDTLWRV ADRYYRQWQI SVYGAILAIY
EANPDAFANG KIYLLMSDSR LQCPSGEMLK QHQNSSKAQI TYEALERTHR Q
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