Gene Sfri_3753 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_3753 
Symbol 
ID4280646 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand- 
Start bp4460554 
End bp4461210 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content40% 
IMG OID638136566 
ProductMSHA biogenesis protein MshJ 
Protein accessionYP_752419 
Protein GI114564905 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGCAAC AATGGCTGGT GTGGTCGTCA AAATTTAATG AACTAAGTCC ACGAGAGCGG 
ATATTGATTA CGGTTGCCTT ATTCGTTGTC ATTGGGATGT TGCTGTTTAT GCCACTAGAG 
TCATTGTGGA AGCAACAGCA AAGTGTCCAG AATCAACTAA AGGGACTCGA ACAAGAAAAT 
TCGATTTCAT TACAACAAGT GGCGCTTTAT GAAGAGCGTT TACAGCTCGA TCCCAATCAA 
GATTATCAAC AACGATTACA GTTGATTACT GAACAGATGC AATTGATGGA TGCCGAACTC 
GCTAATCAAA TGGTTGATAT GGTTCCTGCG GATTATATGC CGACAGTATT AGCCAACTTG 
CTGGGCAATG TGAAGGGCGT CTCGCTCATT TCGTTTGCCT CTATTGCGCC CAAAGCCTTA 
TTACAAGTGG GTGATGGTAG TAAAGTTAAT CTTTACAGCC ATGGTATTAA GTTGACGTTA 
CAAGGCGATT ACTTTTCTAT TTTAGCGTTT ATTAAAGCTG TGGAAAGTAT GCCCGATAAA 
TTGTATTGGA AGCGTTTAGA TTACCGTGTT GAATCTCATC CCGATGCGTT AGTTGAATTA 
GAACTTTACA CACTTAGTGT GAACAAGGAC TTTATCAGTG TTGCGAAACA AGATTAG
 
Protein sequence
MKQQWLVWSS KFNELSPRER ILITVALFVV IGMLLFMPLE SLWKQQQSVQ NQLKGLEQEN 
SISLQQVALY EERLQLDPNQ DYQQRLQLIT EQMQLMDAEL ANQMVDMVPA DYMPTVLANL 
LGNVKGVSLI SFASIAPKAL LQVGDGSKVN LYSHGIKLTL QGDYFSILAF IKAVESMPDK 
LYWKRLDYRV ESHPDALVEL ELYTLSVNKD FISVAKQD