| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_3725 |
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| Symbol | |
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| ID | 4280618 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 4425746 |
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| End bp | 4426636 |
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| Gene Length | 891 bp |
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| Protein Length | 296 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638136538 |
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| Product | transcriptional regulator, LysR family protein |
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| Protein accession | YP_752391 |
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| Protein GI | 114564877 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCCCTT TACACACCTC CATGCGCGGC CTACGTTGTT TTTGCGTCGC TGCTGAATGC
TTAAGTTTTA AAGAAACCGC TAAAAGACTG TATCTAACCC CTTCGGCGGT AAGTCATCAG
ATTAAACAGT TAGAAGAATC TCTAAACCAG AGCTTGTTTA TTCGTCAAAC CCGCGCGGTG
ACATTGACCG AAGTTGGCGC ACGCTTTTAC CAGGCCATCG AGCCGGTAAT GCAGCAATTA
GTCAACACAG TCAGTGAATT TAACCAATCA GACAGAATGC TCGAAGTCAG TATTTCAATG
CCAGAATTCT TTGCCAGTGA ACTGTTTATG CCTAAACTCA TTGGTTGGTC ATCTAAATAT
CCCAACATCA ATCTTAAGCT CGAAACCATT AAGTCGCGCA GCGATATGAT AAAGCATACT
GATGCATCAA TTATGCTCTC TGGTAAGCAA CAAACTAATG CTGATGTGTA TGATTTATTC
CCAATCACTT ATATCCCTGC GTGTAATGCA CAACTTCATG CTGAATTATC TTCACAAGGT
TTTAAAGCAT TAACTCAGGT GCCATTAATA TTGCATAAAG CTCGACCATA CGCTTGGCAT
CAATGGGCCG AAAATGTTGG CTTTGATGCA TTTCAGCCTA AGCAGATAAT TCAACTAGAC
AGTATGTTCA GTGTCGCCCG CGCTGCAGAA CAAGGATTAG GTATTGCTCT CATTCCATTA
CCCATCAGCC AAGCATGGTT CGATAACGGC ACCCTTCTGT CATTATTTCC TCATCCACTT
TTTAGCCATG ATCGCTATTA CCTCATCCGT CATACTAATG AACAGCAGCG GCCAGAAGTG
CAATTGCTGA TCGATTGGAT CCTCAAAAGT TTCCATGATG AAAGTCATTA G
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| Protein sequence | MIPLHTSMRG LRCFCVAAEC LSFKETAKRL YLTPSAVSHQ IKQLEESLNQ SLFIRQTRAV
TLTEVGARFY QAIEPVMQQL VNTVSEFNQS DRMLEVSISM PEFFASELFM PKLIGWSSKY
PNINLKLETI KSRSDMIKHT DASIMLSGKQ QTNADVYDLF PITYIPACNA QLHAELSSQG
FKALTQVPLI LHKARPYAWH QWAENVGFDA FQPKQIIQLD SMFSVARAAE QGLGIALIPL
PISQAWFDNG TLLSLFPHPL FSHDRYYLIR HTNEQQRPEV QLLIDWILKS FHDESH
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