Gene Sfri_3720 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_3720 
Symbol 
ID4280613 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand
Start bp4418534 
End bp4419901 
Gene Length1368 bp 
Protein Length455 aa 
Translation table11 
GC content40% 
IMG OID638136533 
Producthypothetical protein 
Protein accessionYP_752386 
Protein GI114564872 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000107792 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTAACA AAAAAATAAG TCGATTGATG ATGGTGTCTG CAATGGGAGC CTTGTTACTA 
GGGTGTGGCT CAGACAGTGA AGAAAGCAGT GATGATGTCG CTTATGTGCA GTTTTATAAT
GCATCACCGA ATAGCACATC AACTTCGTTA GTGCTGGATG ACTATTCATA TACAGCGGTT
GATTTTGCTG ATGCAATGCC GCGCTATGCT TATAGTACGG GGAGTACAGA GCTGGAGATT
TATGGTCAAG ATGAGGATAG TGAAACGGTA ACCGTTTACA GCGACACCGT TGATTTAGCG
AGCGACTCGA ACCATTTGTA TGTTTTGTAT GGTGACTATC ATGATCCCGA ACTACTGGAT
ATTAACTATT CACGTGATGA AATGGACGAG TTAAATGCCG ACGATGATAA TGACTACAGC
AAAATGGAAG TGTTGGTGGC TAACGTAGCC ACTGATGAAG GTGCGTTTGA TAGCTATATT
TCACTCGATA CCCAAACCAT TGACGAAGCG GTGATGCTGG GTAATGTGCC ATACAGTAGT
TACACGAGCG AACAGATATT CGATACAGAT GATTATATTG TCTATCTTAC CGAAACAGGT
ACAAAAAATG TGCTCTACAC GACAGGTAGC ATGAGTTTAA CCTCCGAAAC GGCTTATAAA
TTGATTATTC GTAATAGCTT TGGCGCGGGT GATATTAACG TCACTATCGA CAGTATTGAC
TCAACCACAA CTCCAGTCAC TTACGCCGCG TTAGAGGCAA CAGCTGATTA TCGGGTGTTT
AATGGTTTAG AAACTCAAAG CATTGATGTT GATGTGGCCA GTAAGCAAGA AACACAGTAC
TTGTATGGGA TTTCACCCTT CACAGTAACG GCTTACCAAT CAACATCGTT TAATGATTAT
GGTATCACCA CTAAAGATGC GACAAGTAAA GCTAAGTTGT TCGATAACTT GTTGGTAACG
TTTAACCAAG ATGAAGTGAA GTCTTTACTG ATTTATCAGC AAGAAGACAG TTCTGTAAAA
GGTATGGTGA TCGAGCAAGA CTTACGACCT CGAGCTTTTG AATATAAAGT CGATGTGGTG
AATTTAGCTT ATGATTATGA TGACTTAACC GTGTATTTTG TCCGTGCTTC AGAAACCATT
GAAACCGCCG AATACACCTT AACTGATTTA GATTTTGTGG AAAAACTCAG TCTGACATTG
CCCGAAGATG ATTATGAAAT TAACATTGTT TACGAAGCCG ATAATGGCAC GCAAACCTTA
GTTTATCAGT CTGATTCAAT TAGCTTTGAT GGTGACAGTA ATTATACTTT TGTGCTGACT
CCAGACACTA CTAGTGCACT AGGTCATAGA CTGACGTCAT TACAGTAA
 
Protein sequence
MFNKKISRLM MVSAMGALLL GCGSDSEESS DDVAYVQFYN ASPNSTSTSL VLDDYSYTAV 
DFADAMPRYA YSTGSTELEI YGQDEDSETV TVYSDTVDLA SDSNHLYVLY GDYHDPELLD
INYSRDEMDE LNADDDNDYS KMEVLVANVA TDEGAFDSYI SLDTQTIDEA VMLGNVPYSS
YTSEQIFDTD DYIVYLTETG TKNVLYTTGS MSLTSETAYK LIIRNSFGAG DINVTIDSID
STTTPVTYAA LEATADYRVF NGLETQSIDV DVASKQETQY LYGISPFTVT AYQSTSFNDY
GITTKDATSK AKLFDNLLVT FNQDEVKSLL IYQQEDSSVK GMVIEQDLRP RAFEYKVDVV
NLAYDYDDLT VYFVRASETI ETAEYTLTDL DFVEKLSLTL PEDDYEINIV YEADNGTQTL
VYQSDSISFD GDSNYTFVLT PDTTSALGHR LTSLQ