Gene Sfri_3697 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_3697 
Symbol 
ID4280590 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand
Start bp4388929 
End bp4389687 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content45% 
IMG OID638136510 
Producthypothetical protein 
Protein accessionYP_752363 
Protein GI114564849 
COG category[S] Function unknown 
COG ID[COG4446] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATGTTA TGCAAAAACG TAATATAGGC AATATCGCAT TGATCGTTGC CATCGTCTCT 
GTCGCGATTA CGGCTTTGAT GGTGTTTGGC TCGTCGTTGG GATTGTGGGA CCCAATTGTC
GGCTTTATGG CCAGCCGTAA TTACAATAAC CTGTTGGGTT ATTTAGTGGT GGTGGTGGCG
GTGCTGGCAT TAGGTACCAG CTTTACCATT AAGCAAGACA GTAACGCTAA AGGCAAAGGC
ATATTAACCT CTACAATAGC GTTATTACTG GGCTTAGCTA TATTGTCGCC AAGCATTATG
GCGTTGGTTA TCAAGCCAGT GAAATACCCA CCTATTCACG ATATTACTAC CAACACTCAA
TCACCACCGC AGTTTGAGTT TTTAACTGAC AGCCGAATTG GCGCTAAAAA TAGTCTGGTT
TATGGCGGAG AAGAGGTTGC CGCACAACAA CGACAAGCTT TCCCTAATAT CCAACCAATT
GCGACAGACT TATCGGTAGA AGCGGCTTAT CAAAAAGCAT TAACGGTCGC TAAAACCATG
GGCTGGACCA TTGTAGCTCA AGACCCAAAA GCACTGCGCT TTGAAAGTAC GGCAACAACG
CCCTTTTTCA ATTTTGCAGA TGATGTCGTT ATCGTTGTTT CTTCGCTAGA GCAGGGCAGT
CGTATTGATT TACGCAGCGT CTCGCGGATT GGCATTGGTG ATGCGGGAGT GAATGCAAAG
CGTATTCAAG AATTTAGTCA GCGGTTCTCT GAGTCTTGA
 
Protein sequence
MDVMQKRNIG NIALIVAIVS VAITALMVFG SSLGLWDPIV GFMASRNYNN LLGYLVVVVA 
VLALGTSFTI KQDSNAKGKG ILTSTIALLL GLAILSPSIM ALVIKPVKYP PIHDITTNTQ
SPPQFEFLTD SRIGAKNSLV YGGEEVAAQQ RQAFPNIQPI ATDLSVEAAY QKALTVAKTM
GWTIVAQDPK ALRFESTATT PFFNFADDVV IVVSSLEQGS RIDLRSVSRI GIGDAGVNAK
RIQEFSQRFS ES