Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_3696 |
Symbol | |
ID | 4280589 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | + |
Start bp | 4387002 |
End bp | 4388732 |
Gene Length | 1731 bp |
Protein Length | 576 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 638136509 |
Product | feruloyl esterase |
Protein accession | YP_752362 |
Protein GI | 114564848 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.663384 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAAACGG AAAATCTATG GGTTCCCCTA GCTTTGGCAC CTTTGTGTAT TGCCCTTTAC GGCTGCAACA GTGACTCATC CACAAAAACG GCTCCACAGC TTGAGGCCGC AACACCTGCG AGTATTATTA GCTGTGCCAC ACTAACAACT GAGTTTAATT ATGCCGCTAC TACAATCACT AGTGCAGAAC TTATCCCTGC GGGTGACGTG GAATATGCCG CAGGCGAAAT CTACCCATCT CCTTCACATT GTTTAATCAA AGGGCTAATG AACGAAAGAA CTGGCATAGG AATGGGCGGA TACGCCGACT ATGCCATTGG TTTTGAAATG CGTTTACCTT CTGACTGGAA TGGCCGTTTT TATTATCAAG CCAATGGCGG CTTAGATGGT TCAGTGCAAA AAGCGGTGGG TCGCTTCCTT ATTTCTGAAA GCAAAGATTC TGGCGCACTA AACAAAGGAT TTGCGGTCAT CAGTTCCGAT ACCGGACACG CATCACCTGC GCCCTTATTC GGGATGGATC CTCAAGCACG TTTAGATTAT GGCTACAATG CAGTTGCCGA ACTCACACCA ATGGCCAAAT CTCTGATTGA AACAGCCTAT GGAAAACAGC CTGACCGCTC CTACTTTGGT GGTTGCTCAA ACGGTGGACG CCATACCATG GTTGCCGCTA CACGTTATGC CGATTTATAT GATGGTTTCT TAGTGGGTAA TCCTGGTTTC AACCTACCCA AAGCTGCTGT TTCGCAAGTT TATGGTATTC AGCAATACTC AAGCCTAGTG AATGTTGATG CCGACAATGT ACTCACCTCT TTACAAAGTA GCTTCACCCA AGAAGAGTTT GCACTCGTTT CAAGTAAAGT CGCTCAGCAA TGTGACGCAC TAGATGGTGC AAGCGACGGA ATGATACAAG ATACTTACGG TTGCCAAGAT GCATTTGATT TAGCTCGAGA TGTGCCAACC TGTTCTGCTG ACCGAGATGG CACATGTTTA ACTGCTGCGC AGAAGTCAGT AATGACCAAC ATTATGTCTG GACCACATAA TAGCAATACA GATGAAGCCA TTTATTCAGA CTTCCCTTAT GACGCTGGTA TGGGAACCAG TGACTATTAT GGCTGGGAGT TTTTCATGGC AATGATGAGA GACCCTGGTG CGTTGGCATT TATATTCTCA ACCGCACCAA CCCCTTACGA TTCATCGGAG CTCGGCTCAT ATGAATATGT GATGAGTCTC GATATGGATA CCGATGTTGA GCGTATTTAT AACATTAATG ACACTTACAC CGAGTCTGGC ATGGAGTTCA TGACGCCACC AAACCCAACA GATCTGACGA TATTACGAGA TCGTGGTGCA AAAATGATGG TCGTTCATGG GACTTCTGAC GCGGTATTTT CACCTAACGA TACGGTTAAT TGGTACAAAG GGTTACAGGA CGTTAATGAA AGTCAAGCCG ACGAGTTTGC TCGCTTATAC TTAGTCCCTG GTATGAACCA TTGCGGTAAC GGACTGGCTA CAGACCGCTT TGACATGCTT GATTCACTTG TTGAGTGGGT TGAACAAGGC CAAGCACCTG AGAGCATAAA GGCTGCTGTT CGTTCTGAAA ATACTGAGTT GCCTGCTAAC TGGTCTAAAA CTCGCACAAG ACCACTATGC CCTTTCCCAA AAGTGGCAAC CTATAGCGGC ACAGGCGACA TGGAAGAGGC GATTAACTTT ACCTGCGTGA CGCCTAAATA A
|
Protein sequence | MKTENLWVPL ALAPLCIALY GCNSDSSTKT APQLEAATPA SIISCATLTT EFNYAATTIT SAELIPAGDV EYAAGEIYPS PSHCLIKGLM NERTGIGMGG YADYAIGFEM RLPSDWNGRF YYQANGGLDG SVQKAVGRFL ISESKDSGAL NKGFAVISSD TGHASPAPLF GMDPQARLDY GYNAVAELTP MAKSLIETAY GKQPDRSYFG GCSNGGRHTM VAATRYADLY DGFLVGNPGF NLPKAAVSQV YGIQQYSSLV NVDADNVLTS LQSSFTQEEF ALVSSKVAQQ CDALDGASDG MIQDTYGCQD AFDLARDVPT CSADRDGTCL TAAQKSVMTN IMSGPHNSNT DEAIYSDFPY DAGMGTSDYY GWEFFMAMMR DPGALAFIFS TAPTPYDSSE LGSYEYVMSL DMDTDVERIY NINDTYTESG MEFMTPPNPT DLTILRDRGA KMMVVHGTSD AVFSPNDTVN WYKGLQDVNE SQADEFARLY LVPGMNHCGN GLATDRFDML DSLVEWVEQG QAPESIKAAV RSENTELPAN WSKTRTRPLC PFPKVATYSG TGDMEEAINF TCVTPK
|
| |