Gene Sfri_3682 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_3682 
Symbol 
ID4280575 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand- 
Start bp4366991 
End bp4367650 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content36% 
IMG OID638136495 
Productcytoplasmic chaperone TorD family protein 
Protein accessionYP_752348 
Protein GI114564834 
COG category[R] General function prediction only 
COG ID[COG3381] Uncharacterized component of anaerobic dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.966559 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCGACA CAACAACGAA TATATATCTT GAACTTCATG CTATTGCTCG CTTATTACAT 
AATGTGTTTT TAGATTATCC GACTGTAGAT TCTATCCAGT ATTTCAATGA TAACCAGCTT 
GATCAAAACT GGCCAGTATT GATAGGATCT GAAGCGAACC AAAAAGGTAA GGTTTTATTA 
AGTCAATTTA TATCGCAATG GCAACCAGAC CAAATTAACG AAGTGAAACT GGATTATGGC 
CAATTATATT TTGGACCCGG AGAACCTAAT GCAATGCCAT GGGGCTCGGT ATATTTAGGT 
GAACAACAAA TTCTTAATGA TCAATCCACC ATTCAATTGA TGAGTTTTTA TAAAAAGTTT 
GGTATTAGCT TTGACTTAAA GTACAACCAA CCAATAGATC ATATTTCTCT ATTCTATTCA 
GTAATCGATC AGCTGTTACA GCAATTATTA GATGAACCCA ATAACAAATT GGCAAAAGAA 
GCATTAATCA TATTATTACA GCAACATATG CTGCCATGGT CTGGGCGCTG CCATGAGTTA 
GCAATTGAAT ATGCACAAAC TGATTTTTAT AAGGCTATTG CTCTGCTTTC CCAAGATTTT 
GAATCAGTAC TTGCTTCCAC CATGAATGTG GTGCCTATGC CAATGCGTTT ATTTCGTTAA
 
Protein sequence
MTDTTTNIYL ELHAIARLLH NVFLDYPTVD SIQYFNDNQL DQNWPVLIGS EANQKGKVLL 
SQFISQWQPD QINEVKLDYG QLYFGPGEPN AMPWGSVYLG EQQILNDQST IQLMSFYKKF 
GISFDLKYNQ PIDHISLFYS VIDQLLQQLL DEPNNKLAKE ALIILLQQHM LPWSGRCHEL 
AIEYAQTDFY KAIALLSQDF ESVLASTMNV VPMPMRLFR