| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_3676 |
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| Symbol | |
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| ID | 4280569 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 4358653 |
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| End bp | 4359345 |
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| Gene Length | 693 bp |
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| Protein Length | 230 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638136489 |
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| Product | two component transcriptional regulator, winged helix family protein |
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| Protein accession | YP_752342 |
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| Protein GI | 114564828 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAACACCG ACAAACTGCA ATTGTTACTG GTTGAAGATG ACCTCGACTT AGCTACGGCG
GTGATCGAGT ATTTAGAGCT AGAAGATATT CTTTGTGACC ATGCCGCCAA TGGGCAAGTT
GGGCTTAATT TAAGTTTGCA GAATCAATAC GATGTGGTGA TTTTAGATTT AAACTTACCC
AAAATGAATG GGTTGCAAGT GTGCGAGTCG TTGCGCATGC AAGGTATGGA TGTGCCAGTG
TTAATGCTGA CAGCCCAAGA CACGTTAGAC GATAAGCTAA CTGGCTTTGC TAAAGGGGCG
GATGATTATT TGGTGAAACC CTTTGCCATG GAAGAACTCA TTGTGCGGAC GCGAGTGTTA
GCGCGTCGGC GCAGTGGCCA AGTCATGCGC TTATCTGTCG GTGACTTAAC CTTAGATTTA
CAACAAAAGC AGGCGTATCG CGCCAATGAG TTAGTAAAGT TATCGCCGAC CGCGTTTAAG
ATTTTAGACG TGCTAATGCG AACAAGCCCT AATCCGGTGT CGCGTGAAAA GCTCATGCAA
AGTGTGTGGG GCGATGATCA ACCTGACAGT AACAGCTTAA AAGTACATAT TTTTAATTTG
CGAAAACAGC TTGATGCTGA GCATGACGTA AAGTTACTGC ACACGATTAG TGGCCATGGC
TTTGCCATTA AAGACGCAGA GCTTTCATCA TAG
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| Protein sequence | MNTDKLQLLL VEDDLDLATA VIEYLELEDI LCDHAANGQV GLNLSLQNQY DVVILDLNLP
KMNGLQVCES LRMQGMDVPV LMLTAQDTLD DKLTGFAKGA DDYLVKPFAM EELIVRTRVL
ARRRSGQVMR LSVGDLTLDL QQKQAYRANE LVKLSPTAFK ILDVLMRTSP NPVSREKLMQ
SVWGDDQPDS NSLKVHIFNL RKQLDAEHDV KLLHTISGHG FAIKDAELSS
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